| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2204 |
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| Symbol | |
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| ID | 6208885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2833490 |
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| End bp | 2834725 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691859 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001819087 |
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| Protein GI | 182414021 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0311908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGA AATCTTCCTC TCGTCCCGGT CGCAACAGCC CGCGTTGGCG GCGTCTCGTG
CCGTATGCCA TCGGCACGGT GATCCTCCTC GCGCTCGTCG CCGGGTTCTG GCCCAAAGCG
GTCGAAGTCG AGATCGCCAC CGTCGCGCAG GGACCGCTGG TGGTGTCCGT ATTCGAGGAG
GGCAAGACCC GGATCCGTCA CCGCTACACG ATTTCGGCGC CGGTGGCGGG GCAACTCAAC
CGCGTGGAGC TCCGCGCTGG CGCGCCGATC GTCGCCGGCG AGACCGTGCT CGCCACGCTT
GAACCGGCGG CCTCGTCCTT TCTCGATCCG CGCGCGCGGG CCCAGGCCGA AGCGATCGTC
CACGCCGCGG AGGCGGCGCG GCAGGCCCGA CAAGCGGACG CGGAGCGAGC ACACGCGGCG
CACGAGCTCG CGCAGAAGGA TGTCGTGCGT GCGGAACCGC TGCACCAGTC CGGCGCGATC
TCCGAGCAGG ATTGGGACGT CATCAGCAAC CGTGCGTTGA TGGCGGCCCG CGAACTGCAC
GCGGCGGAGT TCGCGCTGCG GGTCGCCGAT TTCGAAATTG CGCAGGCGCA GGCCGCCTTG
CTCGAGGCCC AGCGACCGTC GGGCGAAACC GCGGCCACAC TGCGGATCGT CGCGCCGCTC
GACGGCTTCG TCCTGAACGT GTTCGAAGAA AGCGCCCGCG TCGTCGCGCC CGGCCAACCG
ATCATGGAAG TTGGCGACCC ACGCGACCTG GAGGCCGAGA TCGAACTGCT CTCGACCGAC
GCCGTGGCCG TGGCGCCCGG TGCCGACGTG ATCATCGAGG AATGGGGCGG TGAGCAGCCG
CTGCGGGGCC GCGTGGCGCT CGTGGAGCGC GCCGGGTTCA CCAAATATTC CGCGCTCGGC
GTCGAGGAGC AGCGCGTGAA GGTCCGCGTC GATTTTCTCG ATCCGCTGCC GCCGGGCCGC
GAACTCGGCG ATCGCTATCG CGTGGAAGCA CGCATCGTCA CGTGGCGCGG CGAGAACATT
CTTCAACTGC CGACCGGCGC GCTGTTCCGC CGCGGCGGCG ACTGGATGAC GTTTGTGGTC
GAAGGCGGCG ACGCTCAACT GCGCAAGGTG GAGATCGGTC ACAACAGCGG CATCGCCGCC
GAGGTGATCT CCGGTGTGAC CGAAGGCGCC CGTGTCGTCG TGCATCCGCC CGACACCATC
CGCGACGGGC GGCCCGTGAA GGCGCGAGCG AACTGA
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| Protein sequence | MTAKSSSRPG RNSPRWRRLV PYAIGTVILL ALVAGFWPKA VEVEIATVAQ GPLVVSVFEE
GKTRIRHRYT ISAPVAGQLN RVELRAGAPI VAGETVLATL EPAASSFLDP RARAQAEAIV
HAAEAARQAR QADAERAHAA HELAQKDVVR AEPLHQSGAI SEQDWDVISN RALMAARELH
AAEFALRVAD FEIAQAQAAL LEAQRPSGET AATLRIVAPL DGFVLNVFEE SARVVAPGQP
IMEVGDPRDL EAEIELLSTD AVAVAPGADV IIEEWGGEQP LRGRVALVER AGFTKYSALG
VEEQRVKVRV DFLDPLPPGR ELGDRYRVEA RIVTWRGENI LQLPTGALFR RGGDWMTFVV
EGGDAQLRKV EIGHNSGIAA EVISGVTEGA RVVVHPPDTI RDGRPVKARA N
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