| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2200 |
|---|
| Symbol | |
|---|
| ID | 6208352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 2827970 |
|---|
| End bp | 2829334 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641691855 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001819083 |
|---|
| Protein GI | 182414017 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.136771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGGC GCGCCCGCCC CTACTCGCAC GCTGATCCCG CAGTCAGCAA TCCCCTGACG
ATCTGCGCAG ATCGTTCGGA ACTCGCGACC GGGTCACTTC TTTTCAAAGC GCTCCCCGAT
GCCGGAACGT TCGTGCAATC GTTTCGTGAC CGCGCGATCG CTACAGCAAG CAATCGGCAC
TTGAGTCGAA CGCCCGGCGC GCTACTGCCG TCAGTCGAAC TCCGCCAGCG GTTCGAATCC
ACCATCCTGT CCATGAATGC CTGGAACTCC GTTGCTTCGT TTCGCCCGCT GGCCGCGCTC
GCGGCTGGTG TTTTGCTGCC GCTGTATGCG CAGGCCGGCT CGTATGAGCT GACTGATCTC
GGCGATCCCG GCTGGGTCGA CTACGTCGTT CCGTATCAGC CGGTGATCAA CAACCACGGT
CAGGTCGCCT ACACACTGCT CAGCATTTAT CCCGACTACG CTGGCTTCCT CGTCTCCGGC
GGCACGCACA CGCGCGTGCC CACCTTATCC GATGGCACCG GACTGCCGGG CCACGACAAC
TTCGCCACCG ACATTAATGA CAGCGCAGTG ATCGTCGGAA ATTCGCGGAT CAACAACAGC
TCGGACATCA GCCACGGCTA CTACTCGAAC GCCGCAACGG ACGTGCACGA CATCAGCCCC
TTCCCGCCGG AGGAATATAG CGATGCCACG CGCGTGACGA ACAACGGTTT AGTGATGGTC
AGCGGCAATC AGGTCTACTC GATTCCCGAC GGCACGTTCA GTCCGGTTTC CTCTTATCTT
CCGCCGGGCG CAACGCTCCT GAGCCTCAGC GACGACGGCA TCTTCCTCAG TCAGGCCGGC
GGCGTGCTCT ACACCTCACA GGCCGGCGTG CACACGCCGC TCGCGGGCAC CTTTACCGGC
TCGTTGCGCG GCTTCAATGA TCATGGCGAC ATCCTCAGTC TCTCCGGCGA CACGCTTTAC
CTGCTCAAGG GAGGCGTTTC GACGATGCTC GGGACGATGG TGAATCTCAC GGAACTGAAC
GCGCTCGGCG ACAGCGGTGT GGCCGTGGGC ACCTACAACA GTGGCATCGC CGTCGATCCG
ATGAACATGG GCACCAGCGA GCAGCGCGCG TTCGGCTACG TCGGCGGCGC GGTCGTCGAC
CTGAACACGC TGATCGATCC GGCCCTCGGC TACACGCTGC TGACAGCAAA CGATGTCAAC
GATCGCGGCC AGATCACCGG AATCGCCTAC ACGCCGGACG GATTGTATCA CCCCTACATC
CTCACCCCTG TGCCCGAGCC GGCCACCTAC GGCTGGATTG CCGCGCTCGT TCTCGGCGGC
TTCGTGCTCA CGCGTCATCG CCGCTGTTCG TCCGCGACCG CGTAG
|
|---|
| Protein sequence | MPRRARPYSH ADPAVSNPLT ICADRSELAT GSLLFKALPD AGTFVQSFRD RAIATASNRH
LSRTPGALLP SVELRQRFES TILSMNAWNS VASFRPLAAL AAGVLLPLYA QAGSYELTDL
GDPGWVDYVV PYQPVINNHG QVAYTLLSIY PDYAGFLVSG GTHTRVPTLS DGTGLPGHDN
FATDINDSAV IVGNSRINNS SDISHGYYSN AATDVHDISP FPPEEYSDAT RVTNNGLVMV
SGNQVYSIPD GTFSPVSSYL PPGATLLSLS DDGIFLSQAG GVLYTSQAGV HTPLAGTFTG
SLRGFNDHGD ILSLSGDTLY LLKGGVSTML GTMVNLTELN ALGDSGVAVG TYNSGIAVDP
MNMGTSEQRA FGYVGGAVVD LNTLIDPALG YTLLTANDVN DRGQITGIAY TPDGLYHPYI
LTPVPEPATY GWIAALVLGG FVLTRHRRCS SATA
|
|---|
| |