Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2179 |
Symbol | |
ID | 6207307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2799161 |
End bp | 2800810 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641691834 |
Product | gluconate 2-dehydrogenase (acceptor) |
Protein accession | YP_001819062 |
Protein GI | 182413996 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGA AACACGTGAA TGCAGTCGTG GTCGGCGCGG GGGCGGGCGG CGGCGTGGTG GCGAAGGAGC TTGCCGAGGC TGGGCTGTCC GTCGTGCTGC TCGAACGCGG CGACTGGGTG AGTTTCGAGG AGCACGGGCA GGACGAACTG ATCAGCCAGC GCACGACCGT GCTCGGCAAC GCGTATGGAC CGGACGATCG GTTTCCGCGG ATGAGCGAGG GCGCGCCGGG GCAGTGGAAC CGCATACTGC CGCACGAGGG CGGCTACGGC AATAACGCGG CGTGCGTCGG CTCGGGCACG GTGAGCTACG GCGCGATGGC GTGGCGGTTC TCCGAGCAGG ATTTCCGGAT GCGCTCGACC TACGGCCGGC CGGAAGGTTC GACGCTCGAC GACTGGCCGA TCAGCTACGC GGACCTCGAG CCGTTCTACG AGAAGGCGGA GTGGGAAATC GGCGTCGCGG GCGACATGAG CGCAAACCCG TTCGCGCCTC CGCGGCAGAA ACCTTATCCC ATGCCCGCGT TCGGGCAGAA CCGCGAAGGC GAGATGCTCT ACGCCGCGGC GAAGCGACTC GGCTGGCATC CGTTCCCGAT TCCGATGCTG CGCAACTCGG TGCGCTACGG CGGCCGGAAC GCGTGTGCGC ACAACCGCGC CTGCTGCGGC TTCGCGTGTC CCATCAACGC CAAGAACGGC ACGCAGAACA CCGTGATCCC GCGGGCGCTC GCCACCGGCC ATTGCGAGCT GCGCGTGCGG TGCGTGGCCA GCGAGATCGT GGTGGATGAC CACAGCCGGG CTCGCGGGGT GCGCTACTTC GACGCGGAGG ATCGGCCACA ATATCAGACG GCGGACGTGG TCGTGGTGTC GTGCGCGGCG ATCGAGACCG CGCGGCTGCT GCTGAACTCG AAATCGAAGC TGTTCCCGAA TGGCGCGGGC AACCGCCACG ACTGGGTCGG CCGCAATCTG CAGGACCACG CCTACTCGGG CGCGTGGGGG TTGTTCGAGC AGGAGACCTT CGACGACGTC GGGCCGGGCG CGACCATCGC GATCAACGAT TTCAACCATG GCAACGCCGG ACTGCGCGGG GGCGGCGCGC TCTGCAACGA GTTCATCCGG CTGCCGTATC TGTTTACCGG AGTCCGCCCG CCCGGTGCGC CGCGGTGGGG CAAGGCGCAC AAGGATTGGC AGCGAAACTT CTACCGGCGC TGCGTGGGCA TCCACGGACC GGTGCAGGAA ATGCCCGTAG CCGAGATGCG CGTGCAGATC GATCCGGCGT TGAAGGATCA TTGGGGCATT CCCGTCGCGC GGCTCTCCGG CCAGCGTCAT CCGGACGATC TCGAGGTTGG TGCATTTCTG GCCGCGCGTG CGGAAGCCTG GCTGAAGGAA GCCGGCGCGG TGCAGACGTG GAAAGCGGTG GCCGGCCGCG GCTCGCGTCC GGGCCAGCAT CAAGCCGGCT CGTGCCGGAT GGGCAATGAT CCGACCACGT CGGTGACGGA TCGCCACGGT CGCGTGCACG ACATCGACAA CCTCTACCTC GCCGACGGCA GCCTCCACGT GACGAATGGC GGCTACAATC CGGCGCTCAC GATCATGGCG CTGGGGTTCT GGGTGGGGCA TCACATCGCG CGCGAATGGA AAGGCGGGCG GTTCGCATGA
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Protein sequence | MALKHVNAVV VGAGAGGGVV AKELAEAGLS VVLLERGDWV SFEEHGQDEL ISQRTTVLGN AYGPDDRFPR MSEGAPGQWN RILPHEGGYG NNAACVGSGT VSYGAMAWRF SEQDFRMRST YGRPEGSTLD DWPISYADLE PFYEKAEWEI GVAGDMSANP FAPPRQKPYP MPAFGQNREG EMLYAAAKRL GWHPFPIPML RNSVRYGGRN ACAHNRACCG FACPINAKNG TQNTVIPRAL ATGHCELRVR CVASEIVVDD HSRARGVRYF DAEDRPQYQT ADVVVVSCAA IETARLLLNS KSKLFPNGAG NRHDWVGRNL QDHAYSGAWG LFEQETFDDV GPGATIAIND FNHGNAGLRG GGALCNEFIR LPYLFTGVRP PGAPRWGKAH KDWQRNFYRR CVGIHGPVQE MPVAEMRVQI DPALKDHWGI PVARLSGQRH PDDLEVGAFL AARAEAWLKE AGAVQTWKAV AGRGSRPGQH QAGSCRMGND PTTSVTDRHG RVHDIDNLYL ADGSLHVTNG GYNPALTIMA LGFWVGHHIA REWKGGRFA
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