| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2161 |
|---|
| Symbol | |
|---|
| ID | 6207298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 2773031 |
|---|
| End bp | 2774050 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641691814 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001819044 |
|---|
| Protein GI | 182413978 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0653025 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCACC CCGCCTGGAC CGAGTTGAGC GACGAGCTGT TGCTGGAAAA AAAGATTTCG
CAACTCGGAC TCCGGATCGA GGGCACGCCG CTGGACGCCA ACGTGCAGCA GCTCTATGCG
GAGCTGTCGC AGAAGGGGCT CGCGTTTTAT CCGAGCTGTC ACATCGGCGA CGAGTGGTTC
GTGCCGGTCG GGATCCCGGC GATCTTCGTG CCCTTCTTCC TCGCACATGA ACGGCTGCGA
CGGCTCGAGG CGACGATGAT GCTGGAAGTC GAGGGCGACA CGCCGGAAGC GTGCATGCGG
CTGCTGCGGC ACGAGGCGGC GCACGCCTAC GCGTATGCTT ACCAGCTCTT CCGCAAGCGA
TCGTGGCAAC GCGTGTTTGG CCGGACGTCG CGTGAGACGA CGCCGGAGTT CTATCGGCCG
CGGCCTTACA GTCACTCGTA TGTCGTCCAT CTCGAGGATT GGTATGCGCA GAGCCATCCC
GACGAGGATT TTGCGGAGAC CTTCGCGGTG TGGCTGACGC CCGGGTTCGA CTGGCGGGAG
CGGTTTCGCG GCTGGAAGGC GCTGCACAAG CTCGAGTACG TGGACGAGCT GATGCGCTCG
CTGGTGGGCC GCGCGCCGCC GCCGCTGCCC GCTTATCGCG TGCGCGAGCA CGACTGCCTC
AACCTGAAGC TCAAGACCTA CTACGCCCGG AAGCGCAAAC TTTACCAGGA CACGTATCCT
GATTTCTACG ATCGCGACCT GCGGCAGCTG TTCGCCGGCC CGCCCAGCGC GGACGTGGCG
TTCGCCGCCT CGGCCTATTT GCGCCGGCGC CGGCGCGCGC TGATGGATGC GGTCTGCGAA
TGGACCAACG AGAAAAAGTA TCGCGTTCAC AAGCTGCTCG CGCGCTTGAT CGAGCGGTGC
GACCAACTGG ATCTTCATCT CAACCCGAAC GAGCCGCCGC CGGACCTGGC GGTGGCGAGC
TATGTCGCGA CGCTGGTGAT GAACTATCTC TTCACCGGGA AATTCAAACG GACGAAGTAG
|
|---|
| Protein sequence | MDHPAWTELS DELLLEKKIS QLGLRIEGTP LDANVQQLYA ELSQKGLAFY PSCHIGDEWF
VPVGIPAIFV PFFLAHERLR RLEATMMLEV EGDTPEACMR LLRHEAAHAY AYAYQLFRKR
SWQRVFGRTS RETTPEFYRP RPYSHSYVVH LEDWYAQSHP DEDFAETFAV WLTPGFDWRE
RFRGWKALHK LEYVDELMRS LVGRAPPPLP AYRVREHDCL NLKLKTYYAR KRKLYQDTYP
DFYDRDLRQL FAGPPSADVA FAASAYLRRR RRALMDAVCE WTNEKKYRVH KLLARLIERC
DQLDLHLNPN EPPPDLAVAS YVATLVMNYL FTGKFKRTK
|
|---|
| |