| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2140 |
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| Symbol | |
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| ID | 6206201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 2740578 |
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| End bp | 2744213 |
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| Gene Length | 3636 bp |
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| Protein Length | 1211 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641691793 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001819023 |
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| Protein GI | 182413957 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.382987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGCGG CGTGGCTGGG GCTGGTCGCT GCACTCCTCG CGGCCGTCAC GCCGGCGTTC
GCGCTGGATC CGGCCAAGTC GATCCGCCAA TTCAACGTGC AGAGCTGGAC GCGGCAAACC
GGCTTGCCGG CCGACAAGAT CGGCGACGTG GTGCAGACGC CCGACGGTTT CATCTGGCTC
GGCACGCAAA ACGGGCTGGT GCGGTTCGAC GGCCTCGAGT TCAAGGTGGT GCCGATCACC
CTGCCGTACG CCGGCGGTCA GGACGTCGCC AAGCTCTCCA TTGCGCCAGA TGGGGCGCTC
TGGTTCGCGA TCAACCGCGG CGGGTTCGGC CGCTTTGACG GCCAGAAATT CAGTCCCATC
GACGACGCTC GCTTTCAGGA TCCACGAATC GCGGCGGGCA CGATCCTCGT CGGCCGCGAC
GGCGCGATCT GGACCGGTAC CGTCAACGGA CTCAACCGGT GGGTGAAGGA CCGGCCGGCG
GAAAGTTTCT ATGCGGAGAG CGTCCAGCCG AGCGGGACCG TGCTTGCATT GCACGAAGAC
GCTGCGGGGC GCATGTGGGT GGGGACCGGA GGCAGCGGAC TCTATTATCA CGATGGCAAA
AGCCTGCATG AGCTGCGCGA CGAGTCGCTG CGCGGGTATT CGACGGTCGC CCTGACGAGC
GATGCGCGCG GGGCAATCTG GTTGGCGACG GCGCGATCCT TGCGCCGACT CGCGCCGGGG
GCCGAGCGAA CCGAGGTCCT GCTCACGGAG ATGCCGGTGA GCGCTGTGCT CGTGGATCGG
CAGGGCGTGG TCTGGTTCGG CACGACGAGC CGGGGGCTCG GTCGATACGC CGATGGCGAA
TTCACTTTCC TCGGCAAGGC GGAAGGGCTG GCGAGCGACA ACGTGTTCAG CCTATTCGAG
GACCGCGAGG GCAGCCTTTG GGTCGGCACC CCTGAGGGGC TGAGCCAGTT GACGGACCTG
AAGTTCCCGA TCTTCTCGAA GCCCGAGGGG CTGCTCGAAG GCAGTGCCAT CGCCGTGACT
CCGGCGCGGG CGGGCGGCGT GTGGGCGGCG ATGGCGTCCG GGGTGTCGTA TTTTGACGGG
CGGCGGGCGC ACAACATCAC GGATCGCGAG TTGCTGCCGA ATCCCTACCA GCGCACGATT
TTTGAAGCGC GGAACGGCGA CCTCTACGTG GGCGACGGCG ATCGGAACAT CCATGTGTTC
CGCGACGACA GGCTGCTCTA CCGCGTGCAC ACGGAGTTGT GGCCGGATGC GATGACGGAG
GACCACGAAA GCGTGTTGGT CGGCGTGGGC TGGATGCTCT ACCGGCTGCG CGAGGGCGGA
TTGCAGCCGT TCGAATTCCA GCCGGGGCAG GATCCCAATC TCGGCTGGAT CAACCGGCTG
TATGTCAACG CCGACGGAAC GATCTGGGCG GGGACCAACA GCGGAGTGGC GCGGATTCGC
GACGGATTGG TGACACGCTG GAGCCCGGCG CAGGGGCTGT CGTCGGACCG CGTGCACTTT
GTCTTCGTCG ACGTCGACGG CGCGGTGTGG GCGGGACTGC CGACCGGACT CGCGCGGATC
AAGGATGAGC GTGTAGCGAA CGTACGGTTG GCGGACGGGC TGCCGGATCA ACGGATCTTC
GCGATCGTGC CGGACGAGGT AGGAAACTTC TGGATCTCAT CGGGTCGCGG CGTATTTCGG
GCTGCGCGCG AAAAACTCAA TGCGATCGCG GACGGACAGC CGGTCGAACT CGGGGCCGAG
CTGTTCGGTG GGCTCGAGGC GGTGAAGTTC ACCGACCGCA CGGATCAGGG CTTCTCGGGC
TGCCGCTCGA ACGACGGCCG GATCTGGTTT CCCAATCCCC TCGGCGTGAT GACGATTGAT
CCGACGAAAT ATTTCCGGAA CCCGATCGCG CCGCCGGTGC ATCTGGAGCA GGTGCGGGTC
AATGGCGAGG AGCGTCCCGT CACGGAGAAA CTGGTGCTGC AGCCCGGAGA GAATCGGGTC
GAGTTCACCT TCACCGCGCT GAGCTACATC GCGCCCCGCA AGTTGCGCGC CCGCTACCGG
CTGCACGGGC TGGAGGAGGA GTGGGTGGAC GCGGGCCCGC GGCGCTCCGC GCTCTACAGC
CGGCTCGCGC CGGGTAACTA CACGTTTCAG GTGCAGGCCT GCAACGCCGA CGGCGTCTGG
AACACGACGG GCGCGGAACT GAGCTTCCGG CTGCTGCCGC CGTTCCATGA GACCGGATGG
TTTTATGCGC TCTGTGGACT CGTGAGCCTC GCCGCGGTGG TCGGCGGCCA CCGCTGGCGC
GTCCGGCACA TGGAGGTTGC GCGGCTGAAG CTGCAGGCCG AGCGTGACCT CCTCGAAACG
AAAGTCACCG AGCGCACCGC GGAGTTGGCG CACGAGCACG CGCTCCTGAC CACGCTGCTC
GATAGTTCGC CCGACCAGAT CTATTTCAAA GACACCGAAT CGCGCTACCT CAAGGCGAGC
CAGGCGCGCG CGGAAGCGCT TGGGTTGAGC TCCTCGGGTG CGCTCATCGG CCGGTCGGAC
GCCGAGTTGA TGCCCGACAG CGACGTGCGG GCAGCGCTCG CCGGCGAACA GGAGATCATC
CGCACGGGCC AGCCGCTGAT TGGCCAGGTC GAGGTGGAGT CGGAGCAGGC CGGAAACAAG
CGCTGGCTCC TCACGAGCAA GATGCCGCTG CGCAACAAGG CCGGCGAAAT TATCGGCACG
TTCGGCATCT CGAAAGATAT CACGATGCTA AAAGAGGCGG AGGCAAAGCT GATCGAGGCG
CACCGGCAGC TGCTGGTGAC CTCGCGCCAA GCCGGCATGG CCGAGGTGGC CACGAGCGTG
CTCCACAACG TCGGCAACGT GCTTAACAGC GTGAACGTGT CGGCCTCGCT GGTGAGCGAA
AAAATGCGCA ACGCGCGGCT CGACCACCTC GAAAAGGCGG TGGCCATGCT CCAGGCACAC
GCGGGCGACC TGGCGGAATT CCTGGTGAGC GATCCGAAGG GCCGGAAACT GCCGGAGTTC
TTCGCGTTGC TTTCTTCGCA GCTCACGGCC GAGCGCGACG AGATCGCCCG CGAACTCGAG
CACCTGCGCA AGAATGTCGA CCACATCAAG GAGGTGGTCG CGATGCAGCA GAGCTACGCC
AAGGTGGCGG GAGTCGCGGA GAGCATGCCG CTCACGGACG TCGTCGACGA CGCATTGCGC
ATGTATGAAC TCGAGCTCGC CCGACATCAG ATCACGCTCG ATCGCGACTA CCAGGCTCAG
CCGGTGCTGC GGACCGACCG GCACAAGCTG ATGCAGATTC TGGTGAACCT GATCCAAAAC
GCCAAATATG CCTGCAAGGA AAGCAACCGC CCGGACCGGA AGATTATTCT CCGTGTGACC
CAAGCGGACG GGCGCGCGCG GGTGGCAGTG GTGGACAACG GCATCGGGAT TCCGCGCGAA
TCGCTCAGCC GGATCTTCGC GCACGGCTAT ACCACGCGGA AGGACGGCCA CGGCTTCGGG
CTGCACAGCG GCGCCCTGGT CGCGAAGGAA CTTGGGGGCT CGTTGACGGC CGAGAGCGGC
GGAGCAGGGG AGGGCGCGAC CTTCACCGTC GAGTTGCCAC TGCAGGCGTC CGCAGGGCAG
GAGTCGAGCC CCCCACCGGC GGCGTCCATT TCGTAG
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| Protein sequence | MRAAWLGLVA ALLAAVTPAF ALDPAKSIRQ FNVQSWTRQT GLPADKIGDV VQTPDGFIWL
GTQNGLVRFD GLEFKVVPIT LPYAGGQDVA KLSIAPDGAL WFAINRGGFG RFDGQKFSPI
DDARFQDPRI AAGTILVGRD GAIWTGTVNG LNRWVKDRPA ESFYAESVQP SGTVLALHED
AAGRMWVGTG GSGLYYHDGK SLHELRDESL RGYSTVALTS DARGAIWLAT ARSLRRLAPG
AERTEVLLTE MPVSAVLVDR QGVVWFGTTS RGLGRYADGE FTFLGKAEGL ASDNVFSLFE
DREGSLWVGT PEGLSQLTDL KFPIFSKPEG LLEGSAIAVT PARAGGVWAA MASGVSYFDG
RRAHNITDRE LLPNPYQRTI FEARNGDLYV GDGDRNIHVF RDDRLLYRVH TELWPDAMTE
DHESVLVGVG WMLYRLREGG LQPFEFQPGQ DPNLGWINRL YVNADGTIWA GTNSGVARIR
DGLVTRWSPA QGLSSDRVHF VFVDVDGAVW AGLPTGLARI KDERVANVRL ADGLPDQRIF
AIVPDEVGNF WISSGRGVFR AAREKLNAIA DGQPVELGAE LFGGLEAVKF TDRTDQGFSG
CRSNDGRIWF PNPLGVMTID PTKYFRNPIA PPVHLEQVRV NGEERPVTEK LVLQPGENRV
EFTFTALSYI APRKLRARYR LHGLEEEWVD AGPRRSALYS RLAPGNYTFQ VQACNADGVW
NTTGAELSFR LLPPFHETGW FYALCGLVSL AAVVGGHRWR VRHMEVARLK LQAERDLLET
KVTERTAELA HEHALLTTLL DSSPDQIYFK DTESRYLKAS QARAEALGLS SSGALIGRSD
AELMPDSDVR AALAGEQEII RTGQPLIGQV EVESEQAGNK RWLLTSKMPL RNKAGEIIGT
FGISKDITML KEAEAKLIEA HRQLLVTSRQ AGMAEVATSV LHNVGNVLNS VNVSASLVSE
KMRNARLDHL EKAVAMLQAH AGDLAEFLVS DPKGRKLPEF FALLSSQLTA ERDEIARELE
HLRKNVDHIK EVVAMQQSYA KVAGVAESMP LTDVVDDALR MYELELARHQ ITLDRDYQAQ
PVLRTDRHKL MQILVNLIQN AKYACKESNR PDRKIILRVT QADGRARVAV VDNGIGIPRE
SLSRIFAHGY TTRKDGHGFG LHSGALVAKE LGGSLTAESG GAGEGATFTV ELPLQASAGQ
ESSPPPAASI S
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