Gene Oter_2133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2133 
Symbol 
ID6207892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2733869 
End bp2734399 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content63% 
IMG OID641691786 
Producthypothetical protein 
Protein accessionYP_001819016 
Protein GI182413950 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.15074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.357882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA TGACATTGCT CCGATCTCTC GCGGCCGGTT GCAGCCTGCT CGCGCTCACC 
GTCGCCGCTC ACGCGGCCAC TGCCGTCACC GACGCGCAAA TCGCCGCCAT CGTGGTGGCG
GCCAACCAAG TTGACGTCGA CGCCGGCAAA CTCGCCGCCG ACAAGGCCTC CAGCTCCGAA
GTGAAAGGTT TCGCGAATAC GATGGTCACC GATCACACGG CGGTGAACCA GAGCGCGGTC
GGGCTCGTGA CCAAATTGAA GGTCACCCCC GAGGCGAACG ACACGAGTCG CGCGCTCACG
GCCGGCGGCG ACGAGAATCT CGCGGCGCTG CGCAAGCTGC GCGGGAAAGA ATTCGATCGG
GCCTACGTCG ACCACGAGGT CACCTACCAC GAGCAGGTGC TTTCAGCGAT CGACACGGTG
CTCATCCCGA ACGCGCAGAA CGCTGAGCTC AAGGCCTTGC TGGTGAAAGT GCGCCCGGCC
TTTGTCGCTC ACCTGGAACA TGCGAAGCAT CTTCAGGCCA GCTTGCGCTA A
 
Protein sequence
MKSMTLLRSL AAGCSLLALT VAAHAATAVT DAQIAAIVVA ANQVDVDAGK LAADKASSSE 
VKGFANTMVT DHTAVNQSAV GLVTKLKVTP EANDTSRALT AGGDENLAAL RKLRGKEFDR
AYVDHEVTYH EQVLSAIDTV LIPNAQNAEL KALLVKVRPA FVAHLEHAKH LQASLR