| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2129 |
|---|
| Symbol | |
|---|
| ID | 6208400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 2729205 |
|---|
| End bp | 2729657 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641691782 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_001819012 |
|---|
| Protein GI | 182413946 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.802398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTC CGGAACTCCA TCATGAGCTG AGCGCCGGTG AACTGGCGAC GCGCAGCGGC
GTCGCGGTGT CCGCGATTCA TTTCTACGAG GCGAAAGGGC TGATCACGAG CTGGCGAAAC
TCCGCGAACC AGCGTCGTTA TCCGCGCGAG GCACTGCGGC GCGTCGCCAT CGTGAAAGTG
GCGCAGCGGC TCGGGCTGCC GCTGGCGTCA ATCAAGGCCG CGCTCGATGC GTTGCCCAAA
GGTCGGACGC CGACCGATCA GGACTGGCGC AAGCTTTCCG CGCGCTGGCG CGCCGATCTC
GAGCAGCGCA TCGCGAAGCT TACGCAGCTG CGCGATCAGC TGACCGGATG CATCGGTTGC
GGCTGCCTCT CGATGAAACA GTGTCCGCTG CGCAATCCGC TCGACGAACT TGGTGAGCGC
GGCCCCGGCC CGCAGTTGCT CGAACCGGGC TGA
|
|---|
| Protein sequence | MNTPELHHEL SAGELATRSG VAVSAIHFYE AKGLITSWRN SANQRRYPRE ALRRVAIVKV
AQRLGLPLAS IKAALDALPK GRTPTDQDWR KLSARWRADL EQRIAKLTQL RDQLTGCIGC
GCLSMKQCPL RNPLDELGER GPGPQLLEPG
|
|---|
| |