Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2099 |
Symbol | |
ID | 6207858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2692147 |
End bp | 2693334 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641691750 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001818982 |
Protein GI | 182413916 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.579726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0700818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGGCA AGAAAAATTC ATCGCTTGAT CGCGTGCTGG GCCGCGTGGA GGCGCTCGAC TCCGTCAACC TCACGAACCT GGTGCAGCGG CTCGCGCGTG AACGCGGGTT GTTCGAGGAG ATCTTCAACA CGCTGCAGGA AGGCGTGCTC GTCCTCGGCG CTGATGCGCG GATCGAATAC GCCAATGGCG CGGCCCAGCG GCTGATCGGA CTCGGCGACG AAGATCTTTC CGGCCAGACG CTCTGGCGGC TCGCGCCCGG ATTGCGGCCG TCGCTGGAAC CGGCACTGGG GCGCAACGGC GTTTCGGCGC TGCCGGTCGT GGCGCGGGAG TTCGAGCTCA CTTACCCGGA GCCTCGCACC GTGCGGCTCT ACATGGTGCC GTTCCGGATG GAGAACCGGG GCGGGCCGCG GCGGTTCGCG GTGATTCTCT CGGACATCAC GCTGGAGAAA CGCACCACCG AGGCGCGGAT CGAGAACGAG CGCACCTCGT CGATCCTCCT GCTGGCGGCG GGCGTGGCGC ACGAGCTAGG CAATCCGCTC AATTCGCTGA CGATCCACCT GCAGCTGATG GAGCGGCGGC TGAAGAAGGC GAGAACCGCG AAGGACAAGG ACGTGGCCGC GCTCGAGGAT TCGGTTGCGA TCTGTCGCGC GGAGGTGCGG CGGCTCGATG GCATCATCAC CAATTTTCTC GAGGCCGTCC GGCCGCGCGT GCCGGATTTG GTGGAGACAC AGCTCGCCCA GGTGCTCAAC GAAGTGCTGC GGTTCCAGCA GGGCGAGCTC GCGGATCGCG GGATCGAGGT CGAGGTGGAA ACGCCCGCCG ACCTGCCGCT GGTGATGGCG GACCGGAATC AGGTGAAACA GGTGTTCTTT AACATTATGA AGAACGCCGC GGACGCGATG CAGCCGGGCG GGCGGCTGCG GGTCCGTTCC CACGCGGACG ACGACAACGT TTACCTACTG TTCGGCGACA ACGGTGCGGG GATCAAGCAG GAGGACTTGA TCAGGCTCTT CCAGCCGTAC CACACGACCA AGGCTGGCGG CCACGGGCTC GGGCTGATGA TCGTGCAGCG GATCATGCGC GATCATGGCG GGCAGATCGG CATCGAGAGC AAGGAAGGCG TCGGCACGCT CGTCACGCTG CAGTTCCCCC GCCGGGACCG GCGCGTGCGG ATGCTGGAAC AGGGATGA
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Protein sequence | MPGKKNSSLD RVLGRVEALD SVNLTNLVQR LARERGLFEE IFNTLQEGVL VLGADARIEY ANGAAQRLIG LGDEDLSGQT LWRLAPGLRP SLEPALGRNG VSALPVVARE FELTYPEPRT VRLYMVPFRM ENRGGPRRFA VILSDITLEK RTTEARIENE RTSSILLLAA GVAHELGNPL NSLTIHLQLM ERRLKKARTA KDKDVAALED SVAICRAEVR RLDGIITNFL EAVRPRVPDL VETQLAQVLN EVLRFQQGEL ADRGIEVEVE TPADLPLVMA DRNQVKQVFF NIMKNAADAM QPGGRLRVRS HADDDNVYLL FGDNGAGIKQ EDLIRLFQPY HTTKAGGHGL GLMIVQRIMR DHGGQIGIES KEGVGTLVTL QFPRRDRRVR MLEQG
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