Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2020 |
Symbol | |
ID | 6205794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2600075 |
End bp | 2601229 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641691670 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001818903 |
Protein GI | 182413837 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.168799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCCT CCTTTTTGCG CCCGTTGTTC TGCAGCCTCG CCGCGGCCGC TCTCATCGCC ACCGCGCGAG CCGAAGCCGA GCCGATCAAA ATCGGCGAAT ACGCCTCGCT GACCGGCAAG GAGGCCAGCC TCGGCCAGTC CTCGCACCAA GGCACCGTCC TCGCGGTCGA AACCATCAAC GCCGCCGGCG GCGTGCTCGG CCGTCCGCTC CAGCTCATCA CCGAGGATAC GCAGTCGAAG GCCGGCGAGA GCGGCACCGC CGTCCGCAAG CTCATTTCGC GCGACAAGGT CGTCGCGATC CTCGGCGAGG TGGCCTCGAG CCGTTCGCTC GAAGGCGCGC CGATCTGCCA GCGGCTCAAG GTCCCGATGG TCACGCCGGC TTCGACCAAC CCCAAGGTCA CCGAAACCGG CGATTACATT TTCCGCGTCT GCTTCATCGA TCCGTTTCAA GGACCCGTGA TGGCGAAGTT CGCGCTCGAG ACGCTCAAGG CCAAACGGCT CGGACTGATG GTCAGCGCCT CCTCCGCCTA CAGCGTCGGT CTCGCCAAAT ACTTCAAGGA AGCCATCGTC GCCGGCGGCG GGACGATTGT GGCGGAGCAG CGCTATCAGG AGGGCGACAA GGATTTCAAG GCGCAGCTCA CGGCGATCCG CGCCGCGGGC GTCGACGCGA TTTTCAATCC CGGCTACTAC AACGAAGGCG CGTTGATGGT GAAACAGGCG CGCGATCTCG GGATCACCGT GCCGATGTTC GGCGCCGACA GCTGGGAAGC CGAGGCGCTG ATCGAGCTCG GCGGCAAGGC CGTGGAGGGC GTCTTCCTCT GCTCGCACTA TACGCCGACC GATCCGGCGC CGCGCGTGCA GGACTTTGTC CGCGCTTACC GCCAGCGCTG GGGCGCCGGC TACGCCCCGG ACTCCAACGC GTCGCTCGGC TACGATTCGG TGCTCGTGTT GGCCGACGCC ATCCGCCGCG CCGGCTCCGC CGAGCCCAAG GCGATCCGCG ACGCGCTGGC CCAGACTCGG AACTTCGAAG CGGTCACGGG CACGATCACG ATCGACAAGA ACCGCGACGC TTCGAAGAGC GCCGTCGTCA TCACGGTCAA GCACGGCCAG TTCCAGTATG TCCAGACCAT GGAGCGGGCG CCGCTCGCGC CGTGA
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Protein sequence | MPPSFLRPLF CSLAAAALIA TARAEAEPIK IGEYASLTGK EASLGQSSHQ GTVLAVETIN AAGGVLGRPL QLITEDTQSK AGESGTAVRK LISRDKVVAI LGEVASSRSL EGAPICQRLK VPMVTPASTN PKVTETGDYI FRVCFIDPFQ GPVMAKFALE TLKAKRLGLM VSASSAYSVG LAKYFKEAIV AGGGTIVAEQ RYQEGDKDFK AQLTAIRAAG VDAIFNPGYY NEGALMVKQA RDLGITVPMF GADSWEAEAL IELGGKAVEG VFLCSHYTPT DPAPRVQDFV RAYRQRWGAG YAPDSNASLG YDSVLVLADA IRRAGSAEPK AIRDALAQTR NFEAVTGTIT IDKNRDASKS AVVITVKHGQ FQYVQTMERA PLAP
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