| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2011 |
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| Symbol | |
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| ID | 6207767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 2589254 |
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| End bp | 2591170 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641691661 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_001818894 |
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| Protein GI | 182413828 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.935259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.370539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACTT CGATCGACGT TGCCATTCGA CCCGGCGCGC ACGTGCAACC GCGCGGAGTG
CGGTACTGCG TCTGGGCGCC TGACCACGAA CGGCTGGCGG TGCAGGTCCG GCGGGCCGAC
GGCACCGTGG CCCGGCTGCC CCTCGAGCCT CAGCCGGAGG GTTATCACGT CGGCGAAGAC
GCCATCGGCG CGGCGGGTAA TCGCTACATC ATCGAACTGA GCGATGGCAC GTTGCGGCCC
GACCCGGCTT CGCGGTTTCA ACCGGAGGGC GTGCATGGCT GGTCGGAGTG CATCGATCCG
CACGAGTATC GCTGGCGGTG CACCGGCTGG CGTCGACCCG GCTGGCGCGG CCAGTCGATC
TATGAGCTGC ATGTGGGCAC GTTCACGCGC GAGGGCACGT TTCAGTCGGC GGCCCGCCGG
CTGGAGCACA TCGCCGCGTT GGGCGTGCGC GCGATCGAGC TCATGCCCGT CGCGGATTTT
CCCGGCAGCC GCAATTGGGG CTACGACGGC GTGGCGCTCT ACGCGCCGGC GCGCTGCTAT
GGCCGGCCGG ACGATCTGCG GGCGTTCGTC GACGCGGCGC ACGAGCACGG ACTCGCGGTG
ATTCTCGACG TCGTCTACAA CCACCTCGGT CCCGATGGCA ATTACCTGAG CCAGTTCGGC
CGCGCCTACT TCAATCCGGA GCACCACACG CCCTGGGGCC AGGCGTTGAA CTTCGACGGA
CCCGACAACC GGCCGGTGCG CGATTATTTT CTCCACAACG CCGTCGCCTG GCTCGACGAA
TTCCGCTTCG ACGGACTACG GCTCGACGCG ACGCACGCGA TCCGCGATGA CTCGCCGCGG
CACCTGCTCG CCGAGCTCGC CGACGTGGCG CAGGAGCGCG GCGCCTTCCT GATCGCGGAG
GACGAGCGCA ACTCGTGCGA CATCCTGCGG CGGCCCGACG GCGCCGGCGC GGGGCTCGAC
GCCGCGTGGG CCGACGATTT TCACCACCAG GTGCGGGTGG CGCTGACGGG GGTGCAGGAC
GCGTATTTCA AGAATTACGC CGGCTCGCCC GAGCAGGTGG CTGCGACCTT GCGGCACGGC
TGGTTTTATC GCGGGCAGCC GTATCCCTCC TGGAAGGGCC GGCCCCGCGG CGAACCCTGC
GATCACCTCT CTCCCCACGC GTTCGTCCTG TGTATCGAGA ACCACGACCA GGTCGGCAAT
CGCGGGCGCG GCGAGCGGCT GGAACACCTG ATCGCGCCCG CGGCTTTTCG CGCCGCCTCG
GGGCTGCTGT GTCTCGCGCC TTATCCGCTG CTGATCTTCA TGGGCCAGGA GTGGGCGGCG
AGCGCGCCGT TTCTGTTCTT CACCGATCAC GCGGGTGAGC TGGGCACCAA GGTGTCGGAA
GGCCGGCGCA AGGAGTTTTC GGAGTTTGCG CGCGATCACG CCTCAGGCCT CGGCACGGTG
CCCGATCCGC AGGCGCTGGA GACGTTCACG CGTTCGAAAC TGTCTTGGGA CGAACTGCGG
CTCAGTCCGT ACGCGACCGT GCTGCACCTG TATCGCGCCT GCTTGCGGGA GCGCGGCGCG
TGGCTTGAGG AGGTCGCGGC GGATCGGGCG CGCTGGTCGG TCGAGGCCCT CGAGCGCGCC
GTGGCGATTC GCTATCGTCC CGCCGCGGGC CCGGAGCGGC TGGTGCTGAC CTCGCTCGAG
GGCGGCGCGC GGCTGTCACT CCAGGCGGAT TCCCGGCTGC GACCGCCGGC CGGTCACAGC
TGGCAGCTGG CGCTCGACAG CAATGCGAGT TGGATCGAAA CCGCCGCGGG CGCGCCCCCG
GAACGCGTGG TGACCTGTGC CACGTCGGCG CTGCCGGGGG TGGATACGCT GGTGTTCACG
GCGCCGGCGA CCTTGTTGCT GGTCGCGCGG CCGACGGAGG AGCGGGTGCG ATCGTGA
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| Protein sequence | METSIDVAIR PGAHVQPRGV RYCVWAPDHE RLAVQVRRAD GTVARLPLEP QPEGYHVGED
AIGAAGNRYI IELSDGTLRP DPASRFQPEG VHGWSECIDP HEYRWRCTGW RRPGWRGQSI
YELHVGTFTR EGTFQSAARR LEHIAALGVR AIELMPVADF PGSRNWGYDG VALYAPARCY
GRPDDLRAFV DAAHEHGLAV ILDVVYNHLG PDGNYLSQFG RAYFNPEHHT PWGQALNFDG
PDNRPVRDYF LHNAVAWLDE FRFDGLRLDA THAIRDDSPR HLLAELADVA QERGAFLIAE
DERNSCDILR RPDGAGAGLD AAWADDFHHQ VRVALTGVQD AYFKNYAGSP EQVAATLRHG
WFYRGQPYPS WKGRPRGEPC DHLSPHAFVL CIENHDQVGN RGRGERLEHL IAPAAFRAAS
GLLCLAPYPL LIFMGQEWAA SAPFLFFTDH AGELGTKVSE GRRKEFSEFA RDHASGLGTV
PDPQALETFT RSKLSWDELR LSPYATVLHL YRACLRERGA WLEEVAADRA RWSVEALERA
VAIRYRPAAG PERLVLTSLE GGARLSLQAD SRLRPPAGHS WQLALDSNAS WIETAAGAPP
ERVVTCATSA LPGVDTLVFT APATLLLVAR PTEERVRS
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