Gene Oter_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2002 
Symbol 
ID6208397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2573171 
End bp2573692 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content69% 
IMG OID641691652 
Productamino acid-binding ACT domain-containing protein 
Protein accessionYP_001818885 
Protein GI182413819 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.510961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCAA CCCTCGTGAT GACCGTGATC GGTCCGGACC GGCCGGGCCT CGTGCAACTG 
GTGTCGGCCT GCATCGCGGA TCACGGTGGC AACTGGCTCG AGAGCCGGAT GTGCCGGCTG
GGGGGACAAT TCGCCGGCAT CGTGAGCGCC GAGGTGCCGG CGGAGCGGGC GGAGGAGTTG
ACGCGCGCGC TGGCCGGGCT CGAGCCGCAG GGGTTGAAGG TGATCCTCCA CACGGAGCGT
GCGGCGATCG CGCCGGCGAA CGGCAGCCTG GCAGAAATCG AACTCGTTGG GCACGACCGG
CCCGGGATTT TGCGGAGCGT TTCCGCCGTG CTGGCGAAGC ACAAACTCAA CGTGGAGGAT
CTCGCGTCGG AGCGCGTCGC GGCGCCGATG GGCGGCGGCA CGTTGTTTCA AGCGCGGGCA
ACGGTACTCG TGCCGGCCGG TGCGAGCCTC GCGGCGGTTC GCGCCGACCT CGAGGAGATC
GCGGCCGATC TGATGGTGGA TTTGAAGCTG CAGCCGAAGT GA
 
Protein sequence
MLATLVMTVI GPDRPGLVQL VSACIADHGG NWLESRMCRL GGQFAGIVSA EVPAERAEEL 
TRALAGLEPQ GLKVILHTER AAIAPANGSL AEIELVGHDR PGILRSVSAV LAKHKLNVED
LASERVAAPM GGGTLFQARA TVLVPAGASL AAVRADLEEI AADLMVDLKL QPK