| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1993 |
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| Symbol | |
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| ID | 6206578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2553757 |
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| End bp | 2556183 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641691643 |
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| Product | permease |
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| Protein accession | YP_001818876 |
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| Protein GI | 182413810 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.483054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.18288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATC TCCGCTTCGC CTGTCGTCAG TTGTTGAAAA CGCCCGGCTT CACGCTGGTG
GTGATTCTCT CCCTCGCGTT CGGCATCGGG GCCAACGCCA CCGTGCTCTG CTGGCTGCGT
GCCGTCGTGC TGAACCCGCT GCCGGGCGTC GCGCACTCCG AGGAGATGGT CGTGATCGTC
TCCAATCAGG GCGGCGGCAA CGCCTCGCTG CCCGATCTGC GCGACATCGC GACGATGCGC
GAGGTATTCG CCGGCACGCT GGCACACATG CCAACACCGG CCTGCCTCAC GGTCGAACGC
CAACCCGAAT GGCTGCAGGC ACAAATCGTC ACCGCCAATT TCTTCGAACT GCTCGGCGTG
CAACCACTGC TCGGCCGGAC GTTCCTGCCC GAAGAGGACC AAAAACCCGG CGGCAATCCC
GTACTCCTCA TCAGCGAGCA GCTGTGGCGC CGCCGGTTCG GCGCGGATCC GGCCGTGCTC
GGCCAGGTGG TCGATCTCAA TCGTCACAGC TTTACGATCG TCGGGGTCGT GCCTGACTCG
TTCCCGGGCA CGCTCGCGCC TGCGTCGTTC GACGTCTGGG CGCCCGCCTC GATGATCTGG
GAAGTGCGGA ATCAGGGGAC CGGTTTTCTG ACGTCACGCA GCGCCCGCGG CTGGCTCAAT
CTCGCCCGGC TCCAGCCGGG CGTCACGCTC GAGCAGGCCC GGGCCGCGAT CACGACCTTC
GACGCGCGCA TGGCCCGCGA GTATCCCACC ACCAATGGTT ATGCGCATCA CCAGGTGCTC
CCGCTGTCCG AGACGCCGTG GGGCACGCCG ACGGTGATGG CGCCCGCGCT GTGGCTGCTG
CTGGCGGTGA GCGGCGGTGT GCTGTTGATC GTCTGGGCCA ATGTCGCGAA CCTGCTGCTC
GCCCGGGCGA TGAGCCGGCA GAAGGAGATC GCCATCCGGC TGGCGTCGGG CGCCAGTCGT
GCGCGGATTG TGCGGCAACT GCTCACCGAG AGCGTGCTGT TGGCCGCGCT CGGCGGCGGG
CTCGGCGTGC TGATGGCCAG CTGGGCCACG GACGCCGCGC CGCTGTTCCT GCCGGAGGAC
CTCGCCCGCG CCGCCCAACT GCACTTTCCA CTCGATCCGG GAACGCTCGC GCTCACCGTA
CTGCTCACGC TCGGCACCGC GCTCGCGTTC GGTCTCTTTC CCGCGCTGCA GGCCACGCGC
CCGGATCTCT TCACGGTGCT CAAGGAAGGC GGCCGTTCCT CGTCGGGCGG CGGCGCGGTC
CATCACCGGT TGCGCGCCGC GCTCGTCATC GCCGAGGTCG CCATTGCACT CGCGCTGTTG
ATCAGCGCCG GGCTGTGCGT CAAAGGGCTG CGGCAGGCGC AGCGCATCGA TATCGGCTTC
GAGCCCGATC ATGTTTTGAC GGCCGACTTT CGCATCGGGA TGAATGGCTA CACCCGCGAG
ACCGGCCCTG CCTTCTATCG TCAGGCTCGC GAGCGGGTGG CGGCGCTCCC CGGGGTCGAA
GAGGCCGCGT GGGCCAGTTG GTTCCCGTTG GGGCTCTCCG GCTGCAAAGG TTCCGGCGTG
TTCGTGGAGG GCTACGAACG CCCCGAAGGC GAAGACACGA CTTACGAACT CGTCATCGTC
TCGCCCCGTT ACTTCGCCGC GATGCGCATC CCGCTGCTCG CCGGCCGCGA TTTCACCGAC
CGCGATGATG CCAGCGCGCC GGTCGCGATC GTCAACGAGG CGTTTGCGCA GCGTTTCTGG
CCCGGACAGG ATCCGCTGGG CCGTCGCTTC CGCAGCAACA GCACCTGGGT GACGATCGTG
GGCGTGGCCA AGACCGGCAA ATACAACCGG CTGCAGGAAA CGGCGCGGCC GTTCTACTAC
CTCCCGTACC AGCAAGGGGT GCCCGATCTC GACCTCGCGC TGTGCGTCCG CACCGCCGCC
GATCCCGCGG GGTTCACCTC CACCCTGCGC CGAACGTTCC GGGAACTCGA TCCCGGCGTG
GAAATGCTCC AAGCCATGCC GCTCGCCGCG TATTCGTCGA TGGTCCTGTT CCCGCACCGG
CTCGCGTCGG CCTTGCTCGT TTTCCTCGGC AGCGTCGCGC TGCTGCTCGC CGCGATGGGC
GTCTACGCCG TGATCGCTTA CGGCGTCGCG CAGCGGACGC AGGAGTTCGG CGTGCGCATG
GCCCTCGGCG CGAAGCCGGG CAATGTAATC TGGCAGGTGC TCCGGCACGG TCTCGGGCTG
GCCCTGCTCG GCACCTTGGC CGGACTCGTG TTGGCCGTCG GAGTCACCCA GGCGCTGACC
AGTTTCCTCT ATGGCGTGAG TCCATTCGAC GCGGTCACCT TCCTCATCGT TTCGCTGCTC
CTGATCGCCG TGGCCGCGCT CGCCTGCTGG GTGCCGGCCC TGCGCGCCAC CCGCGTCGAT
CCGATCGTCG CGCTGCGCTC CGAATAG
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| Protein sequence | MQDLRFACRQ LLKTPGFTLV VILSLAFGIG ANATVLCWLR AVVLNPLPGV AHSEEMVVIV
SNQGGGNASL PDLRDIATMR EVFAGTLAHM PTPACLTVER QPEWLQAQIV TANFFELLGV
QPLLGRTFLP EEDQKPGGNP VLLISEQLWR RRFGADPAVL GQVVDLNRHS FTIVGVVPDS
FPGTLAPASF DVWAPASMIW EVRNQGTGFL TSRSARGWLN LARLQPGVTL EQARAAITTF
DARMAREYPT TNGYAHHQVL PLSETPWGTP TVMAPALWLL LAVSGGVLLI VWANVANLLL
ARAMSRQKEI AIRLASGASR ARIVRQLLTE SVLLAALGGG LGVLMASWAT DAAPLFLPED
LARAAQLHFP LDPGTLALTV LLTLGTALAF GLFPALQATR PDLFTVLKEG GRSSSGGGAV
HHRLRAALVI AEVAIALALL ISAGLCVKGL RQAQRIDIGF EPDHVLTADF RIGMNGYTRE
TGPAFYRQAR ERVAALPGVE EAAWASWFPL GLSGCKGSGV FVEGYERPEG EDTTYELVIV
SPRYFAAMRI PLLAGRDFTD RDDASAPVAI VNEAFAQRFW PGQDPLGRRF RSNSTWVTIV
GVAKTGKYNR LQETARPFYY LPYQQGVPDL DLALCVRTAA DPAGFTSTLR RTFRELDPGV
EMLQAMPLAA YSSMVLFPHR LASALLVFLG SVALLLAAMG VYAVIAYGVA QRTQEFGVRM
ALGAKPGNVI WQVLRHGLGL ALLGTLAGLV LAVGVTQALT SFLYGVSPFD AVTFLIVSLL
LIAVAALACW VPALRATRVD PIVALRSE
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