| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1982 |
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| Symbol | |
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| ID | 6206729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2536270 |
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| End bp | 2537901 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691632 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001818865 |
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| Protein GI | 182413799 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.17175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCT GGTGTTTCCC GCGGCTCGTT TCTGTTCTCT GCGCCGCCCT GCTCGCCGGC
TCCTGCGCGC GGCGCGAGCC ACCAGTCGAG GTGGCCACGC GCGAGCACAC CCTGCTCCTC
GGCAATCTCG CCGAGCCCAC CGATCTCGAT CCGCACACGT CAATCACCTA CACGGATCAG
AACGTGATCC TCGCGCTGTT CGAGGGACTC ACCGCACTCG ACGAGAAAAC CTCCCGCGCG
GTCCCCGGGG TCGCGGAACG CTGGGACGTT TCCGACGACG GTCGCACCTA CACCTTCCAC
CTGCGGCCCG CGGCACGCTG GTCCAACGGC GACGCGGTAA CCGCGCGCGA CTTCGCCTAC
TCGTTCGAGC GCATCCTCTC GCCCGGGCTC GCGTCCGAAT ATTCCTACCT GCTCTGGCCG
ATTCGCGGCG CCCAAGCCTT CAACCGCGGC GATGTAAAGC CGTTCGCCGA CGTGGGTGTC
ACCGTCGTCG ACGACCACAC GCTGCGACTC ACGCTCGAAC GGCCGACACC CTACCTGCTT
GCGCTTGCCG CCAATCCCGT GTGGTTCCCG GTGCACCGGG CGACGATTGA AAAATTTGGC
CGGATCGATC AACGGAGCAC CGCCTGGACC CGGCCGGGCA ACCTCGTCGG CAACGGCGCG
TTCACGCTCG CCGAGTGGTT GCCCAACGCC CGGATCGTCG TTTCCAAAAA CGCACACTAC
TGGGGCGCTG CGGCGAACAC GCTCGAGAAG ATCGTTTTCC TCCCCACGGA AAATCCCGAC
GTCGAGGAGC GCGGGTTCCG CACGGGACAG GTGCACATCA CCTATGGCGT GCCGATCGAG
AAGATCGCCC GCTATCGCGA GACCGCGCCC GAACAGCTCC GGCTCGATCC GTTCCTGCAG
ACATTCTTCT TGCGCTTCAA CGTCACGCGT CCCCCGCTCG ACCGGCCCGA GGTGCGTCAG
GCGATCGCAC TGGCGATCGA TCGTGAAGCC CTTGCGCGCG CCGTGCTGCG CGGCTCGCGA
CTCGCGGCCC CGCACTTCAC GCCGCCCGGC TGCGCGGGCT ACACGGCCGA GGCGCGCGTC
GGCTTCGACC TCGCGAAAGC CCGCGCGCTC CTGGCCGACG CCGGATTTCC CAACGGCGAA
GGGCTGCCCG TGCTGGAGTT TCAGTTTCGC AACGATGACA CGCAGCCCAA GGTGGCCGAA
GCAATCCAGT CGATGCTCGG GCAGATCGGC GTGCGCGTGA GCCTCGCGCC GTTCGAGCAA
AAGACGTGGC TGCAAAATCA GCAGTCGCTC GCCTACACGA TCGTCTTCTC GGCGTGGGTC
GGCGACTTCG CCGATCCCGC CACGTTCCTC GACCTGTTCG CCGGTGGTGG CGGCAACAAC
TGGACCGGCT GGGCGGACGC GGAGTACGAC CGGTGGCTGC AGGAGGCTTC GCGCCTCACG
GATTCCAACG CTCGATTCGC GCTTTTCCAG CGGGCCGAAG CGCGGCTGCT GGCGCAGGCG
CCCATCACGC CGCTGTTCTT CGGTGCCCGC ACCTATCTGA TCAATCCGGC GGTGAAGAAC
TGGGAGCCCG CCCTGCTCGG CTTCCATCGC TACCAGTTCG TCCGGCTCGA GCCGGCCGCG
CCCGCCTACT GA
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| Protein sequence | MRFWCFPRLV SVLCAALLAG SCARREPPVE VATREHTLLL GNLAEPTDLD PHTSITYTDQ
NVILALFEGL TALDEKTSRA VPGVAERWDV SDDGRTYTFH LRPAARWSNG DAVTARDFAY
SFERILSPGL ASEYSYLLWP IRGAQAFNRG DVKPFADVGV TVVDDHTLRL TLERPTPYLL
ALAANPVWFP VHRATIEKFG RIDQRSTAWT RPGNLVGNGA FTLAEWLPNA RIVVSKNAHY
WGAAANTLEK IVFLPTENPD VEERGFRTGQ VHITYGVPIE KIARYRETAP EQLRLDPFLQ
TFFLRFNVTR PPLDRPEVRQ AIALAIDREA LARAVLRGSR LAAPHFTPPG CAGYTAEARV
GFDLAKARAL LADAGFPNGE GLPVLEFQFR NDDTQPKVAE AIQSMLGQIG VRVSLAPFEQ
KTWLQNQQSL AYTIVFSAWV GDFADPATFL DLFAGGGGNN WTGWADAEYD RWLQEASRLT
DSNARFALFQ RAEARLLAQA PITPLFFGAR TYLINPAVKN WEPALLGFHR YQFVRLEPAA
PAY
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