| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1959 |
|---|
| Symbol | |
|---|
| ID | 6206878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 2456805 |
|---|
| End bp | 2457542 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641691608 |
|---|
| Product | thioesterase |
|---|
| Protein accession | YP_001818842 |
|---|
| Protein GI | 182413776 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.119057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCCGC GGCCGCAGCC GGCGGCGCGG CTCCGGCTGG TGTGTCTGGC GCACGCCGGC
GCGGGCGCCT CCACTTTTTT CAGCTGGGGC GCGGCGCTGC AGTCCGCCGG CATCGAGGTC
CGCGCGGTGC AGTATCCCGG CCGCGAAAAC CGCTACGGCG AACCGTGCCT GCCGCAGGCG
CCGGCGATGG TGCAGGCGCT GGCCGATGCG TGGCCGGAGA TCGCCCCCGG CCCGTGCGCG
CTGTACGGTC ACAGCATGGG CGCGCTGCTC GGGTTCGAGC TCGCGCGCGA ACTCGCCCGC
CGCGGCGCGG CGAACCCGCC GCGGCACCTG TTTCTCGCCG GGCACAACGC GCCGCATCTG
CCCTCGCGGC TGCCGCTGCT GCACACGCTG CCCGATGGCG AGTTCCTGCC GGCCGTGGCG
CGACACTATG GCAATCTGCC GGCCGAGCTC ATCGCCGACC GCGAGATGGC CGCGCTGCTC
GGCCCGATTC TGCGCGCGGA TTTTCAATTG GTGAACGAGT ACGCCTGGCG GGACGCCGGC
CCGGTCGACG CGCCGCTCAC GGTGTTCGGC GGCACGGAGG ATCCCTGGAC CAGCGAGCCG
GGCCTCGCGG CCTGGTCGCG GCACACGCGC GGTCGCTGTC AGCTGCACCT GTTCGCGGGC
GGGCACTTTT TCCCGCAGGC GCACCGGACG GCGCTGCTCG CGCGGCTGCA AGCGACGCTC
GCCGGCCTTG CGGGTTGA
|
|---|
| Protein sequence | MVPRPQPAAR LRLVCLAHAG AGASTFFSWG AALQSAGIEV RAVQYPGREN RYGEPCLPQA
PAMVQALADA WPEIAPGPCA LYGHSMGALL GFELARELAR RGAANPPRHL FLAGHNAPHL
PSRLPLLHTL PDGEFLPAVA RHYGNLPAEL IADREMAALL GPILRADFQL VNEYAWRDAG
PVDAPLTVFG GTEDPWTSEP GLAAWSRHTR GRCQLHLFAG GHFFPQAHRT ALLARLQATL
AGLAG
|
|---|
| |