| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1932 |
|---|
| Symbol | |
|---|
| ID | 6204861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 2429413 |
|---|
| End bp | 2430279 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641691580 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001818815 |
|---|
| Protein GI | 182413749 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.243938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAA AATTCACCAC GTTATTGGCA TTGTTATTCT TGCTACCACT TACCAGCGTA
AACGCTGAAC TTAGTCGCAG GATTCCGATT CGAGACCCGC TCGCCGCAGA CCGCACATAT
TTTGTTCGTC CGGACGGCGA TGATGCTAAC AGTGGATTGA TCGACGACGC GACTGGTGCC
TTCCGCACGA TCCAAAAGGC GGTTAACGTT GTTTCAGAAG ATCTCGATTT AGGCGAGTTC
GACGTGACGA TCCAAATTGC CGATGGAGTT TACACTTCTG GCGTGTGGCT GAGGCCGTGG
CTCAGCTCAG GTAGCGAAGT AGTTCTTAGG GGTAACGTGG CATCGCCTTC CAGCGTACTG
ATAGACCTGA CAACTCCAGG AGAAACAGGG GGATGCTGCT TTTACTCCGG TGGTGGCCGC
CAGGTATGGC GCATCGAGGG TGTAAAGATG CAGACTAGCG CGCCAGGAGG AGCGTGCATC
AAAGCTGATT ACAGTGAGGT GGTATTTTCG AACGTTGTGT TTGGCGCGGC GACGGATTTC
CATGTATTTG CCGCAAACCA TGGGAAAGTT TTCGCGGCTG GCAGCTATTC AATCGTAGGC
CCCGCGAAAC GCCACCTCTA CGCCATTCAG TCGGTAATAC TGCTATCGCC CGCGGCAACA
GTGTCTCTCG TCGGCACCCC ATCGTTCGCG TGGCACTTCG CGGCATCCGA ATCGTGCGGC
GTTATCGACG TAACTGGCGT GAGTTTTTCT GGGCCCGCGA CTGGAGCGCG ATACTATGTT
ACATTGAACG GGGTGATCAA AGCATTTGGT ACTATTTTAC CGGGGAATGC AGCAGGCATA
GCTGATTTCG GAGGACAATA CCGGTAA
|
|---|
| Protein sequence | MQQKFTTLLA LLFLLPLTSV NAELSRRIPI RDPLAADRTY FVRPDGDDAN SGLIDDATGA
FRTIQKAVNV VSEDLDLGEF DVTIQIADGV YTSGVWLRPW LSSGSEVVLR GNVASPSSVL
IDLTTPGETG GCCFYSGGGR QVWRIEGVKM QTSAPGGACI KADYSEVVFS NVVFGAATDF
HVFAANHGKV FAAGSYSIVG PAKRHLYAIQ SVILLSPAAT VSLVGTPSFA WHFAASESCG
VIDVTGVSFS GPATGARYYV TLNGVIKAFG TILPGNAAGI ADFGGQYR
|
|---|
| |