| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1931 |
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| Symbol | |
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| ID | 6206002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 2427838 |
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| End bp | 2429214 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641691579 |
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| Product | Pectate lyase |
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| Protein accession | YP_001818814 |
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| Protein GI | 182413748 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.24321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTCG GCGACCCCGG ATCCGGCGTG GCGAACGGCC TGCGGATCAT GTGTGTCGCC
ATGCTCACGC ACGCGGCGGT CGCCGCGGAG TTCTACGTCG CGCCGGACGG GCGGGACGCG
AATCCCGGCA CGATCGAAGC GCCCTTCGGC AGCGTGCAAC GGGCGTCGTC GGCGGCGCGT
GCCGGCGACA CCGTGTTCAT CCGCGGTGGC ACCTACGTGA TGAGCGAGGC CCAGATCGCC
GGCCGGGACG GCCCGTATGC CTGCGTCGTC ATGTTCGAGC GCAGCGGCGC GCCGGGCCGG
CCGATTCGGT ACTGGGCGTA TCCCGGTGAA CGACCGGTGT TCGACTTCTC CCACGTCAAA
CCGGCGGGGC GGCGGGTGAC GGCGTTTCGC GTGAACGGCT CGTGGCTCCA TCTGCGCGGG
CTCGAGGTGG TCGGCGTGCA GGTGACGATC AAGGAGCACA CCCAGTCGAT CTGCTTCGAC
AATCGCGGCA GTCACAACGT CTACGAGGCG CTCAGCCTGC ACGACGGCAT GGCGATCGGA
CTGTGGATCG GCGGCACGGC TAGCCACAAT CTCGTGCTGA ATTGCGACGC CTATCGGAAT
CACGACCCGG TGTCGGAGGA CGGACTGGGC GGCAATGTCG ATGGGTTCGG CTACCACGGC
AAGAAAGGGA GTGTCGGCAA CGTGTTCCGC GGCGGCCGGG CCTGGTTCAA CAGCGACGAC
GGCTTCGATT TCATTCACGC CGAGGAAGCG GCGGTGATCG AGGGCTGCTG GGCCTTCTAC
AACGGCTACT CGCCCGAGTT TCGTTCGCTC GCCAACGGCA ATGGGTTCAA GGCGGGCGGA
TTTTCGCGCA CGCCGGTCGA TCGGCTGCCC GATCCGATTC CGCGCCATGT GGTCCGACGC
AGCTTGGCGG TGCGGAACAA GGCGAACGGG TTTTATGCGA ATCACCACGT CGGCGGACTC
GATTTCATTC ACAACACCGG CTACCGAAAC CGCGTGAACT TTAACCTGCT CGGTCGTGAA
CCGTCGGACA ACACGACGCT GATCGATGGC CGCGGGCACC GGTTGAAGAA CAATCTCGGG
TTTGCGGCGC GGGAGAACGA GGTCGCGCGG CTCGATCTCC AGCGGAGCGA CGCGAGCGGC
AATTCGTTCA CTCTGCCCGT GGAAATCACC GCGGAGGATT TTCTGAGCGT CGACGAGGCG
GAACTGACGA AGCCGCGGCA GCCGAACGGC GACCTTCCGA GGGTCCGTTT TCTGCACCTG
GCGCCGGGCA GTGATGCGAT CGACGCTGGT GTGGATATCG GCCAGCCGTT CAACGGCGCG
GCTCCCGATC TGGGCGCGTT TGAGGCGCTG CAGCCTCCGA TTACGGCACC CCACTAG
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| Protein sequence | MRLGDPGSGV ANGLRIMCVA MLTHAAVAAE FYVAPDGRDA NPGTIEAPFG SVQRASSAAR
AGDTVFIRGG TYVMSEAQIA GRDGPYACVV MFERSGAPGR PIRYWAYPGE RPVFDFSHVK
PAGRRVTAFR VNGSWLHLRG LEVVGVQVTI KEHTQSICFD NRGSHNVYEA LSLHDGMAIG
LWIGGTASHN LVLNCDAYRN HDPVSEDGLG GNVDGFGYHG KKGSVGNVFR GGRAWFNSDD
GFDFIHAEEA AVIEGCWAFY NGYSPEFRSL ANGNGFKAGG FSRTPVDRLP DPIPRHVVRR
SLAVRNKANG FYANHHVGGL DFIHNTGYRN RVNFNLLGRE PSDNTTLIDG RGHRLKNNLG
FAARENEVAR LDLQRSDASG NSFTLPVEIT AEDFLSVDEA ELTKPRQPNG DLPRVRFLHL
APGSDAIDAG VDIGQPFNGA APDLGAFEAL QPPITAPH
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