| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1906 |
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| Symbol | |
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| ID | 6207827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 2392875 |
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| End bp | 2395295 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691554 |
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| Product | permease |
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| Protein accession | YP_001818789 |
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| Protein GI | 182413723 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC TTCGTTTTGC GCTGCGCCAG CTGAGGAAAT CGCCGGGCTA CACTACGATC
GCGGTGCTCA CGCTCGCGCT CGGGATTGGG CTGAACACCT CGATCTTCAG CGTGCTGAAC
CTGCTGCTGT TGGCGCCGCT GCCGTATCCA CAATCTGAAC GGCTCGTGCG CATTTACGCG
AAGACCCCGC AGTCGGATGC GTGGGGACTC ACGCCGGTGG CTTACTACAC GTTGCGCGAC
GCGAACCCAC AGTTCGGCCT GATGGGCGGT TTCCTCTGGT GGGGGGCCAC GCTCACTGAG
CCGGACCGGC CGGCCGAGGT GCTGGTGTCG ATGCGCGTAT CGCCGGAGCT GCTGCCGACG
CTCGCGGTGC CGCCGCTGCT TGGGCGGTGG TTCACGCGCG AGGAGGACCT GCCGGGCAGC
CCGGTGATCA TCGTCAGCGA GTCGCTCTGG CGACGCTGGT TCAATAGCGA CCCGGACGTG
ATCGGCCGGA GCGTGCGCGT GGACGGGCAG GCGGTGACGA TCGTCGGCGT GATGCCGGCC
AGCATGGCGG CGCCGATCGT TTTCGGCGAC GTGGATTTCA TCCGGCCGAT GGGCCTGACG
ACCGCAGAGC GTACCAGCCG CGTGGAGCAC TGGATGCACC TGGTGGCGCG GCTGCGGCCG
GGGCAGTCGC TGGCGGCGGC CCGGGCGGAG ATGGATGCGC TCGCGATCCG GTTGCAGCGC
GAACATCCGG AAGATTTCGC CCAGCTGGAG TTCAACGTGC TGCCGCTGCA CGCTTCGGGG
GTGGATCTGG GTAGCCGGCA GGTGACGTGG CTGTCGCTGG GGCTGGCGGC GTTCGTGCTG
GCGATCGCCT GTGCGAATCT GGCGAATCTC CAGCTGGTGC GGGCGAGCGG ACGCACACGG
GAGTATGCGG TGCGGGCGGC GTTGGGGGCG TCGCGGGTGC ATTTGCTGCG GCCGCTGCTG
TGGGAAGGAG CGGTGGTCTC GCTCGCGGGA GGCGTAGCCG GGCTGGTGGT GGCGCGGGTG
TGCAACGGCT GGATCGGCGC GCACGTGGTG TTCAACAACA CGCATGTGGG CCACGCGCTG
CCGCTCGACG GCCGCGTGTT GGCGTTCGCG ACGATCGCGT CGCTGATAAC CGGACTCGCC
TCAGCCACAG CGCCGGCGTG GTGGATTGCG CGGGGTGCGC CGGGAGCGGC GTTGAAGGAG
CAGGGACGCG GCGCGACGGC GAGTCGTGGA CAGCAAACGC TGCGGCGCGG GCTGGTGGTG
GCGGAGTTCG CGCTGGCGCT GGTGTTGCTG GCCGGGGCTG GGCTGATGTT GGGCGGGCTG
AATCGCTTTC TGCATCGAGA CATCGGCTGG CGACCGGAAG GCATCGTGCA CGGGTATGTG
CCGACGCAAA CGCCGGGGTA TGCCCGGGAC GATGCGGTGG TGCATCGATT TTACGAACGC
GTGCTCGAGC GGATGCGCGA ACTGCCGGGG GTGCAGTCGG CGACTTTTTC ATGGGAGTTG
CCGATTGCGG GGTACAACAG CGCGCGGCGA TTCGTGGTCG ACGGCCGGCC GGCGGCGCAA
GCGGGCGACG AGCCGGTGGC GTTTTTCAAC GGCGCGTTTC CCGGCTATTT CGAAACACTC
GACATCGCGC TGCTCGCCGG GCGCGACTTC ACGCGGCACG ACGGGGCGGA CGCGCCGCGC
GTCGCGATCG TGAATGAATC CCTCGCGCGC GCGTTCTGGC CGGGCGAGAG TGCGCTGGGT
CGGCGCGTGA GCTGGGGCCC GCTGGACGCG CCGGTGTGGC TGGAAATCGT GGGCGTCGTG
CGCGACGTGC AGTTCCCGGG CACGCTGACG CGGCCGGTGA CGCAGTTCCA AGTTTATGTG
CCCTGCGCGC AGGAAGTGTG GCGGTGGGGG GCGTTTGCGC TGCGGACCAA GGTGGCACCC
GAGGCGATGG TCGAATCGAT GCGGCGCGTC GTGGCTGAGG TGGATCGGGA AATTCCGATG
TGGGAGCCGC GCGCGATGAC GACCGAGATC GACCGGCGGC TGGCGAACTC GACGTTGATC
GGTCAGCTGC TCGGGGGAGT GGCCGTGCTG GGGCTCTTGC TCGCGGCGCT CGGAATTTAT
GGGGTGATTG CCCAGACCGT GGTGCAGCGC ACGCCCGAGA TTGGTGTGCG ACTGGCGCTG
GGGGCGGACG CGCGCGCGAT TTATCGGCTC GTGCTCGGCT CGGGGCTGAG ACTCGCGGTT
GCGGGCGTGG CGTGCGGGAC GATCGGCGCG TATTTCGTGA GCCGGGTGCT GGCAAACCGG
ATGCCAGAGC TGCCGCCGCC GGGCGGAGCC GTGCCGTTCG GGGCGATCGT CGCGCTGCTC
GGCGCCGCGC TCGCCGCGTG CTGGCTGCCG GCGCGCCGGG CGATGCGCGT GGATCCGGTG
ATCGCGCTGC GCTCGGAGTA G
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| Protein sequence | MTDLRFALRQ LRKSPGYTTI AVLTLALGIG LNTSIFSVLN LLLLAPLPYP QSERLVRIYA
KTPQSDAWGL TPVAYYTLRD ANPQFGLMGG FLWWGATLTE PDRPAEVLVS MRVSPELLPT
LAVPPLLGRW FTREEDLPGS PVIIVSESLW RRWFNSDPDV IGRSVRVDGQ AVTIVGVMPA
SMAAPIVFGD VDFIRPMGLT TAERTSRVEH WMHLVARLRP GQSLAAARAE MDALAIRLQR
EHPEDFAQLE FNVLPLHASG VDLGSRQVTW LSLGLAAFVL AIACANLANL QLVRASGRTR
EYAVRAALGA SRVHLLRPLL WEGAVVSLAG GVAGLVVARV CNGWIGAHVV FNNTHVGHAL
PLDGRVLAFA TIASLITGLA SATAPAWWIA RGAPGAALKE QGRGATASRG QQTLRRGLVV
AEFALALVLL AGAGLMLGGL NRFLHRDIGW RPEGIVHGYV PTQTPGYARD DAVVHRFYER
VLERMRELPG VQSATFSWEL PIAGYNSARR FVVDGRPAAQ AGDEPVAFFN GAFPGYFETL
DIALLAGRDF TRHDGADAPR VAIVNESLAR AFWPGESALG RRVSWGPLDA PVWLEIVGVV
RDVQFPGTLT RPVTQFQVYV PCAQEVWRWG AFALRTKVAP EAMVESMRRV VAEVDREIPM
WEPRAMTTEI DRRLANSTLI GQLLGGVAVL GLLLAALGIY GVIAQTVVQR TPEIGVRLAL
GADARAIYRL VLGSGLRLAV AGVACGTIGA YFVSRVLANR MPELPPPGGA VPFGAIVALL
GAALAACWLP ARRAMRVDPV IALRSE
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