Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1900 |
Symbol | |
ID | 6206847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2386502 |
End bp | 2387206 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641691548 |
Product | ABC transporter related |
Protein accession | YP_001818783 |
Protein GI | 182413717 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.938738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAGT CTCTCATCCA CCTCGAAGGT GTCACCAAAG TCTTCCTCAC CGATGAGGTC GAAACGCACG CGCTGTCCGG CATTCACATG GACATCGTCA AGGGCGAATA CGTTTCGATC GCCGGCCCCT CGGGCTGCGG CAAGTCCACG CTGCTCTCGA TCCTGGGTCT GCTCGATTCG CCCACGGAGG GTTCCTACAT TCTCAACGGC CGCCCCGTGC AGGGCCTCTC GCTTCCGGAG CGCGCGCGCA TCCGCAACCG CGAGATCGGA TTCATTTTCC AGTCGTTCAA CCTCATTGGC GACCTGACCG TCTACGAGAA CGTCGAACTG CCGCTCACCT ATCGCGGCAT GCCCGCCGCG GAGCGCAAGA CCGCCGCGAT GGAAGCGCTC GAGAAGGTGG GCATGGGCCA CCGCGCCAAG CACCTCCCGT CCCAGCTCTC CGGCGGTCAA CAGCAGCGTG TCGCCGTCGC CCGCGCGCTC GCCGGCAAAC CCGCCGTCCT CCTCGCCGAC GAACCGACCG GTAACCTTGA TTCGAAAAAC GGCGACTCGG TCATGCAGCT CCTCGCCGAG CTCCACAAGG CCGGCGCGAC CATCGTCATG GTCACGCACG ACGTCCGCTT CGCCCGCCAC GCCGACCGCA CCGTCCATAT CTTCGACGGC CGCGTCGTGC AGGAGCAGAT GGAGTCCGAT CCGACGCGCG CCTGA
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Protein sequence | MPESLIHLEG VTKVFLTDEV ETHALSGIHM DIVKGEYVSI AGPSGCGKST LLSILGLLDS PTEGSYILNG RPVQGLSLPE RARIRNREIG FIFQSFNLIG DLTVYENVEL PLTYRGMPAA ERKTAAMEAL EKVGMGHRAK HLPSQLSGGQ QQRVAVARAL AGKPAVLLAD EPTGNLDSKN GDSVMQLLAE LHKAGATIVM VTHDVRFARH ADRTVHIFDG RVVQEQMESD PTRA
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