| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1899 |
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| Symbol | |
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| ID | 6205797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2383846 |
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| End bp | 2386392 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641691547 |
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| Product | permease |
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| Protein accession | YP_001818782 |
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| Protein GI | 182413716 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCCG ACCTTCGCTT CGCCCTGCGG ACGCTGGCCA AGACCCCCGG CTTCACCGCA
CTGGCCATCC TCACTCTCGC GCTGGGGATC GGCGCCAACG CGGCCATCTT CGCGCTGATT
CACGGCGTCG TGCTGCGGCC GGTCGTGCCC GTCCGGCCGG ACGAGGTCGT CAACCTGTTC
ACCGCGCGCC AGGGCGCGAG CCGCGATTAC CGGCAGTTCT CTCACGCTGA ATACCTGGCG
CTGCGCGAGG CGCAGGACAC GTTCGCCGAC GTCGCCGCCA CCAACGCCGT GCTCACCGGC
ATCGGCGAGG GCCAGAACGT CCGGCGCAGC TTTGCGTTCT TCGCCTCGGA AAACTTCTTC
TCGATGCTCG GCACGACGCC CGCGGTCGGT CGGTTCTTCT CCGCCGACGA ATCGCGCCCG
AACGCCAGCG TGCCCGTCCT CATCGCGAGC TACAACCTGT GGCAGCGCTT CGGCGGCCGG
CCCGACTTCG TTGGCAGCAC GCTGCGCCTC AACGGGGCCT CCTATACGGT GATCGGGGTG
ACGCGCCCCG GATTCAGCGG GCTCAACGCC CTGCTCGCGC CCGACGTTTG GCTGCCGCTC
GGCCAGTTCG CGCAGTTCTC GCAACCTTTC GCCAGCGCGA CCGGCGTGCA GGACCTCGCC
GATCCGCGCA CCTTCACGCT CAACCTCACC GCGCGGCTCG CGCCCGGCGT CACGCTGGCG
AATCTCGGCA CGCGACTCCC TGCGCTGGCC CAGCGGCTCA ACGCCGTGCA GCCGGCCGAT
CTCGCCACCT CACGCGAGCT GCAGTTCGAA CCGCCGTCGC GGTTCAGCAT CAGCACCACG
CCGTCCGGCG ACAGCTCCGG TTTCATGCTC GCCGCCACGA TGTCGGGCAT GGCCGGCTGC
GTGCTGCTGA TCGCCAGCCT CAATCTCGCG AACATGCTTC TCGCGCGCGG CTCGGCCCGC
CGCCGCGAAA TCGCCGTTCG GCTCGCGCTC GGCGCCACGC GCGGGCGCAT CGTTCGCCAG
CTGTTCGTCG AGGGCCTCGT GCTCGCGCTC ATCGGCGCCG CGCTCGGACT GCTGCTCGCG
CTCTGGAGCA ACGACCTGCT GTTGAATTCA CTCCAGACGC TCTTCAGCAC GATGAATTTC
TCGCTCGCCG TCGAATCGAC GCCGAGCCCG GCCGTGCTCA CGGCAACGTG CGTGCTCGCG
CTGGTCGCCA CCGTGCTGTT TTCCGTCGGC CCCGCGCTGC GCGCCACCCG CGTCGATCTG
GTGAACGACC TGAAGCAGCA GGGCGCGGCG AGCGCCGCGA CCGGACGGCT GAATCGCTTC
TTCGCCCCGC GGCACCTGCT CGTCATGGCG CAGATCGCGC TTTCGCTGAT GCTGCTCTTT
ACTGCGGGAT TGTTTTTCCG CGGGGCGCTC GCCGCCGGCG ACGTTCAGCT CGGGTTCGAA
CCGCGCGGCC AGCTCGTGGC CGAGCTCGAT TTCTCGCTCT CCAACTCCGC GCCACAGCAG
GCCGCCGCCA CGATGTTTAG CGCGCTGCAG CGCGTGCGCG AACTGCCCGG CGTCACCGCG
GTCGCGATCG GCACCCAGCT GCCCTACGGC AACGTCACCG ACATGCCGCG TTTCGCCGAC
GCCGCCGCCG CGCCCGCCGC GAAGACGAAC CCCGACTCGC CCGAGCCGGG CGTCGATGCG
TTGCTCGGCG CCGTGACGCC GCAATATTTT GCCGCGCTCG GCGTCGCCGT GCTCCGCGGC
CGCACGTTCA GCGACAACGA AGCCCAGGAC GACAAATCGC CGCGGGTGGC CATCATCGAC
GAGGCTTTTG CGCGCAAGAT TTTCGGCGAT CAGGATCCGA TCGGCCGCCG GATCCGCTAT
CTGCAGCCGC GCACCGACGG TACGCCCGCG GAGATGGAGA TTGTCGGCGT GTGCGGTTCG
CACCGGCACG ATGCATTGCA GCGCACCGAT AGGCCACGTG TGTTCGTTCC CTTCTCTCAC
GCTTATCAGC CGTCCGTCTT CATCCACGTG CGGATCGCTG CGCAGGACCG CGCGGCCGAA
CTTGCCGCAC TCACCGCCGT CCGCGGGGCG CTGCTGTCCA CCAGCCCGGA TCTGCCGTTG
CTCCTCCTGG CGCCGATGCG CGACCTGCTC GATCGCAACA TCCAGCTCTG GATCGTGCGG
CTCGGCGCGG TGCTCTTCGG CGTCTTCGGC GCGATCGCGC TGCTCCTGGC CGCGATCGGC
GTCTATGGCG TGAAGGCCTA CACCGTCGCC CGCCGCACGC GTGAATTCGG CATTCGCATC
GCGATCGGCG CGCGGCCAGG CGACGTGTTC GCGTTGGTCA TGCGACAGGC CGTGCTCCAG
ACGGTGTTCG CCGCCGCGAT CGGCCTGCTG CTCGCGCTGG CCGCCGGCCG GCTCGTCGGC
CAGCTGCTCT ATCAGGTCAG CCCCTCCGAT CCGCTCGTGC TCGGCATCGC CGCCGCGTTT
CTCACCGTCT CCGCCCTGCT CGCCTGCTTC GTCCCCGCCC GCCGCGCGAC GAAGGTCCAG
CCGATCGAGG CGCTCCGGAC GGAGTAG
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| Protein sequence | MLSDLRFALR TLAKTPGFTA LAILTLALGI GANAAIFALI HGVVLRPVVP VRPDEVVNLF
TARQGASRDY RQFSHAEYLA LREAQDTFAD VAATNAVLTG IGEGQNVRRS FAFFASENFF
SMLGTTPAVG RFFSADESRP NASVPVLIAS YNLWQRFGGR PDFVGSTLRL NGASYTVIGV
TRPGFSGLNA LLAPDVWLPL GQFAQFSQPF ASATGVQDLA DPRTFTLNLT ARLAPGVTLA
NLGTRLPALA QRLNAVQPAD LATSRELQFE PPSRFSISTT PSGDSSGFML AATMSGMAGC
VLLIASLNLA NMLLARGSAR RREIAVRLAL GATRGRIVRQ LFVEGLVLAL IGAALGLLLA
LWSNDLLLNS LQTLFSTMNF SLAVESTPSP AVLTATCVLA LVATVLFSVG PALRATRVDL
VNDLKQQGAA SAATGRLNRF FAPRHLLVMA QIALSLMLLF TAGLFFRGAL AAGDVQLGFE
PRGQLVAELD FSLSNSAPQQ AAATMFSALQ RVRELPGVTA VAIGTQLPYG NVTDMPRFAD
AAAAPAAKTN PDSPEPGVDA LLGAVTPQYF AALGVAVLRG RTFSDNEAQD DKSPRVAIID
EAFARKIFGD QDPIGRRIRY LQPRTDGTPA EMEIVGVCGS HRHDALQRTD RPRVFVPFSH
AYQPSVFIHV RIAAQDRAAE LAALTAVRGA LLSTSPDLPL LLLAPMRDLL DRNIQLWIVR
LGAVLFGVFG AIALLLAAIG VYGVKAYTVA RRTREFGIRI AIGARPGDVF ALVMRQAVLQ
TVFAAAIGLL LALAAGRLVG QLLYQVSPSD PLVLGIAAAF LTVSALLACF VPARRATKVQ
PIEALRTE
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