| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1897 |
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| Symbol | |
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| ID | 6205063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2378636 |
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| End bp | 2381131 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691545 |
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| Product | permease |
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| Protein accession | YP_001818780 |
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| Protein GI | 182413714 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCC TGCTGCAGGA TCTGCGTTTC GCGTTGCGTC TCTTCGCCAA GTCACCCGGG
TTCACCGCGG TCGTCGTGCT GACCCTGGCG CTCGGGATCG GCGCCAACAC CGCCATCTTC
ACGGTCATCA ACACGACCTT CCTGCGCGCG CTGCCTTACG CCGAGCCCGA CCGGCTCGCC
CACGTCTCGG AGAGCAACAA GCAGTGGGAC GACATGTCCG TCTCCTACCC CAACTTCCTC
GACTGGCAGA CCGCGCAGAC GGTGTTCAGC GCCATGGCGA TCTACCGGAC CGACGGCCAA
AAGCTTCAAA CTCCCACCGC GACCGAGCGC GTCAGCGTCG GCTACGTCTC CGGCGAATTC
TTCCCCGCGG TCGGCGTGCA TGTCGCCCGC GGTCGTGATC TCACTCCCGC TGACGATGCC
GTCGGCGCCG CGCCCGTCGC GTGGATCACG CACGCACTGT GGGAGCGGAT GTTTGCCAGC
TCACCCGACG TGGTCGGCAC CACCACGATC CTCGACGGCC AGAACGTCGC GATCGCCGGC
GTGCTGCCGC CGTCGTTTCG GTTTCATCGC GGCATGGACG TGATCGTGCC CCTCGCGCCG
TATGCCGAGG CGATGTTCAT GCGGAACCGG GAAAATCACA ACGGCACCGC CGTGATCGCC
CGGCTCAAGC CCGGTGTCAC GTTCGAGGCC GCCCGCGCGC AAATGACCGC GATCGGTCAG
CGGCTCGCGC AGGAATATCC CTCCGCCAAC GCCGGCGCCG GCATCAACGT CCGGCCGCTG
CGCGAACGCT TCGCCGGCTG GGCGCGCACG AATCTTTTTC TGCTCACCGG GGCCGTCGGC
ATGGTGCTGC TCATCGCGTG CGTCAACGTC GCCAACATGC TGCTCGCGCG CGCTGGCGCC
CGCGATCGCG AGATGGCGAT CCGCACCTCG CTCGGCGCCA CGCGCGGCGA CCTGCTTCGG
CAACTGCTCG TGGAAAGCAT GCTGCTCGCC ATGGTCGGTG GCGGGCTCGG CCTGTTGCTC
GGCAGCTGGG GTTACCAGTT CGCCCAGTCG CAGCTCGTGC CTTGGGAGCT GCGCGGGCTG
GTCGACGCGA GCAGCGGCGT CGACGGCCGC GTGCTCGCCT TCGCCGCCGG CATCGCACTG
TTCACCGGTT TCGCGTTTGG TATCGCGCCG GCCTGGCAGC TCTCGCACAC CAACCCGAAC
GACGCGCTCA AGAACACCCG GCGCGTCGTG CGCACGGTGT TCGGCCGGTT TCACCTCGGC
GATCTGCTGG TCGTCGCGCA GGTCGCGCTC GCGTTGATGC TTCTCGTCGG CGCCGGGCTG
ATGATCCGCA GCCTGCAACA GCTCGCCAAC GTGTCCTCCG GCCTCGCGCC CGAGCGCGTG
CTCACGTTGC GCGTGACGAC GCCGCCGATG CAGGAATACA TGGGCAATCC GTTCGCCTAC
GTGGCACACC ACGAGCGCGT GCTCGAAGCG GTGCAGCGTC TGCCCGAGGT CGAGAGCGCC
GCCTTCGGCT CGAGCCTGCC GTTCTCCTGG AACACCTCGA GCAGCTGGGT CTTCCGCCCC
GACCGGCCCG CACCTGCCGC CGGCGATTAT CCTTCCGCCA ACACGCACGT CATCACGCTC
GACTACTTTC GCACGATGGG CATTCCCCTG CTGCGCGGCC AGAGCTTCGA CGGCCACGAA
CCGCAGCCGG TGGTCCCGCC CGGCGGAATG AAGGGCATGG AAACGCTCGT CGAGATCTAT
CGTGATCTCG AGATCCAGAC GGTGATCAGC CAGCGCATGG CCGACCTGCT TTTCCCGGGC
GAGGATCCGC TCGGCAAACT GTTCCAACTC GGCAAGCCCG AGATGCACCT GCCGCGATTC
CGCGTCATCG GTCTGGTCGG CAACACGACC CAAAACGGAC TCGACCAGGC GGCACCGCCC
GAATTCTACG TCACGCTCCG CCAGTTCCCC GCGCCGAACG ACCAGTTCCT CGTCATCCGT
TCGCGCCTCG ATCCCGCCGC GCTGACTGCC TCGGTTCGCC GCGCCATCCA GGCGGTCGCA
CCGCACGAGA CCGTGTTCGA CATCAAGCCG ATGTCGCAGC GGATCGACGA CACCGTGGCC
GGGCGACGGT TCAACATGAG CCTGTTCATC TTTTTCGGCG GCGTGGCGCT CCTGCTCTCG
GCGATCGGCA TCTACGGCGT GCTCGCGTTC AACGTCAGCC GCAAGACGCG CGAAACCGGC
ATCCGGATGG CACTCGGCGC GCAGCGCCGC GACATCATCC TCGGCACGCT CGGCCACGGT
TTCGCGCTGG TGCTGCCCGG CGCGGTCATT GGGCTCGCGG GAGCCTGGAT CGGTTCACGG
CTGCTGCAAA GCCAGCTCTA CGCCGTCAGC GGCACGGACC TGCTCACGTA TGTGGTAGGC
GGTCTTGTCC TGCTCGTGAT CGCGTTCACC GCCTGCTTCC TGCCGGCGCG CCGCGCCGCG
AAGGTCGATC CGGTTCATGC GTTGCGCTCC GAATAG
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| Protein sequence | MSTLLQDLRF ALRLFAKSPG FTAVVVLTLA LGIGANTAIF TVINTTFLRA LPYAEPDRLA
HVSESNKQWD DMSVSYPNFL DWQTAQTVFS AMAIYRTDGQ KLQTPTATER VSVGYVSGEF
FPAVGVHVAR GRDLTPADDA VGAAPVAWIT HALWERMFAS SPDVVGTTTI LDGQNVAIAG
VLPPSFRFHR GMDVIVPLAP YAEAMFMRNR ENHNGTAVIA RLKPGVTFEA ARAQMTAIGQ
RLAQEYPSAN AGAGINVRPL RERFAGWART NLFLLTGAVG MVLLIACVNV ANMLLARAGA
RDREMAIRTS LGATRGDLLR QLLVESMLLA MVGGGLGLLL GSWGYQFAQS QLVPWELRGL
VDASSGVDGR VLAFAAGIAL FTGFAFGIAP AWQLSHTNPN DALKNTRRVV RTVFGRFHLG
DLLVVAQVAL ALMLLVGAGL MIRSLQQLAN VSSGLAPERV LTLRVTTPPM QEYMGNPFAY
VAHHERVLEA VQRLPEVESA AFGSSLPFSW NTSSSWVFRP DRPAPAAGDY PSANTHVITL
DYFRTMGIPL LRGQSFDGHE PQPVVPPGGM KGMETLVEIY RDLEIQTVIS QRMADLLFPG
EDPLGKLFQL GKPEMHLPRF RVIGLVGNTT QNGLDQAAPP EFYVTLRQFP APNDQFLVIR
SRLDPAALTA SVRRAIQAVA PHETVFDIKP MSQRIDDTVA GRRFNMSLFI FFGGVALLLS
AIGIYGVLAF NVSRKTRETG IRMALGAQRR DIILGTLGHG FALVLPGAVI GLAGAWIGSR
LLQSQLYAVS GTDLLTYVVG GLVLLVIAFT ACFLPARRAA KVDPVHALRS E
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