Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1895 |
Symbol | |
ID | 6204939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2373162 |
End bp | 2375669 |
Gene Length | 2508 bp |
Protein Length | 835 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641691543 |
Product | permease |
Protein accession | YP_001818778 |
Protein GI | 182413712 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.88407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACG CGCTCCGCTC GCTCTTGAAG TCCCCCGGCT TCACCGCTCT CGCGATCGTC ACCCTCGCCC TCGGCATCGG GATGAACACC GCGATGTTCA GCATCCTGAA CGGCTTTCTG CTCCGTCCCC TTTCGTATCC CCATTCTGAG CGGCTCTTCC AGCTCGACCG CCAGTCGCCG CAGCAGCCGC ACGACGACCA TTCGCCGGCC AACGCCGCCG ACATCGTCGC CGCCGCGAGC GACGTCGCCG ACCTCGCGAT GACGCGCTAC TGGGCCTTCA CGCTCACCGT TGCCCACCAG GCGCCCGACG TGCCGATCGC GCTGCGCGTC AGCCCGAATT ATTTCGACGT CCTCGGCGTT CGTCCCGCAC TCGGCCGCGT CTTTCGGCCC GACGAAAATA CGTCCGGCCG CAGCAATGTC ATCGTCCTCA CGCACCGTTA TTGGCAAAAC CATTTCCAGG GTGCGCCCGA CATCGTGGGC CGCACCGTCC GGCTCGACGG GACGCCGGTC GAGATCGTTG GCGTGCTTCC GCCCGACCCG GATGAGGTCC GCCTCCTCGG CGCTGTCGGC TTTTATCGGC CGCTCGCGTT GTCCGACGCC GAGCGCGCCA ACCGCAGCGA GGGCGGCCTC GGCTTGATTG GCCGCTACCG GCCGAACGTC ACTCCGGAAC AAGCCGCCGA ACGCTTCGCG GTCATCGCCC GCCGCCTGGC CGCCGATCAT CCTGCTGAAA ACGGCAACCT CCAGCTTGGG CTCCGGTCGC TGCAGTCCAC GCTGCTCGCC GGCACCGGCC TGAACATGAC GCTCGTGCTG ATCGGCCTCT CCGGTTTCGT CCTGCTCATC GCCTGCGCCA ATCTCGCGAA CCTACTCCTC GCCCGCGCGA TCTCCCGGGT CCACGAGTTC TCCATCCGCG CCGCCCTCGG CGCCACCCGC GCTCAGCTCA TCCGGCCGCT CGCCCTCGAA TGCCTCCTGC TGGCCACGGC CGGTGCGTCC GCCGCCCTCC TCGTGGCCAC CTGGACCAGC GATTGGCTCA GCGCCCGCTT CGGCGGTCCG GACACGCCCG TGGACTTCTC CGCCGACCCG CGCGTGCTCG CTTTCGCGCT CGCCGCCTCG GCGCTCACGG CGCTGCTCTT CGGCGTCGGT CCGGCATGGT GGGCGGCGCG CGTGTCGGCC AACGACTCGC TGAAGGCCGG CGGCCGCGGC GCCACCGGCA CCCGCACGCA GACGCGTTAC CGGCAGCTTC TCATCGCCAC CCAGTTCGCC CTCGCCCTCA TGCTGCTTGC CGGCGCCATC TTTTTCGTGC GCGGGCTCGA GAAGCTCATT GGCGCCCGCA AGGGTTGGAA CCCCATGCCC GTCGTTTCCG GCGTGATCAA TCTCGCCTCG CCCACGCGTT TCGGCAGCGC CGAGCCGATC CTCGCGTTTC ACGCGCAGCT GCGCGATCGC CTCCTCGCAC TGCCTGGCGT GAAGAACGCC TGCGTCAGCT TCGACCTGCC GCTGTTCAAC TCCCCCTCGC GCCGCAACTT CCTCGTCGAG GGCCGACCTG CACCCGCGGC CGGCCAGGAG ATCGCCGCCT TCACCAACGG CGTCTCGCCC GGTTTTCTCG ACACGATGGG ACTGCACCTC CTCCGCGGCC GGTTCATCGA TAACACCGAC CGGCTCGGAT CCCGACCCGT CGTCGTGATC AACGAGACCA TGGCCCGCAC GCTCTTCTCC GGGGAGGAGG CGGTCGGCCA CCGTCTGGCC CAGGCTGGCG GTGACAAACC GGTGTGGGCG GAGATTGTCG GCGTAGTCGA GGACACCCGC GCGCTCGACA TGGCGCCGTC CCCGGTGCGG TTCCAGGTCT ACAAGCCGTT CGCACACGAA GCGTGGCAGT TCGTCACGAT CGCCGTGCGT GTCGCGGATC CCGCGAAGTC CGCCGCGCTG CTCGAGCCGA TTCGCCAGAC GGTCGCCGCG CTCGATCCCG ACCAGCCTGT CCTGCGACTG ATGACAGTGC CTCAACGGAT CGAAAGTAAT TTCAAGGTCT GGGAGACGAT CGATCGGCTG CTCATGGTCT TTGCCGGACT CGGACTGTTG CTGGCTGCGC TGGGCATCTA CGGGGTGGTT ACCCGCGTGG TGACGCAGCG CACTCCCGAG ATCGGCATCC GTCTCGCGCT CGGGGCGCAA ATCCGCGACA TCGTCGGTCT CGTGCTCGGC GGCGGCGTCC GCCTGGCGTT CGCCGGCACG CTCCTCGGTT CGATTGGCGC CGCGTGCTTG CTGCAGTTCA CCTCGCAGGC GCTTCCCGCG TTCGGCCGCG TCGAGCCGGT TACGATCGTG CTCTCGGCGG TCGCCTTGGT CTCGTTGCCC TGCTCGCCTG CCTGCTTCCG GCCCGCCGCG CTGCGCGCGT CGACCCTGCG GTGGCCTTGC GGACCGAGTG ATCGCTGCCA CGAGCGGCGA TCCGCACGTC ATACCATGTT GGGAATGACG TCGGCATCGG CTGATCGGTG CCGAACGTGG CGCAGCCCGG AGGGATGA
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Protein sequence | MKHALRSLLK SPGFTALAIV TLALGIGMNT AMFSILNGFL LRPLSYPHSE RLFQLDRQSP QQPHDDHSPA NAADIVAAAS DVADLAMTRY WAFTLTVAHQ APDVPIALRV SPNYFDVLGV RPALGRVFRP DENTSGRSNV IVLTHRYWQN HFQGAPDIVG RTVRLDGTPV EIVGVLPPDP DEVRLLGAVG FYRPLALSDA ERANRSEGGL GLIGRYRPNV TPEQAAERFA VIARRLAADH PAENGNLQLG LRSLQSTLLA GTGLNMTLVL IGLSGFVLLI ACANLANLLL ARAISRVHEF SIRAALGATR AQLIRPLALE CLLLATAGAS AALLVATWTS DWLSARFGGP DTPVDFSADP RVLAFALAAS ALTALLFGVG PAWWAARVSA NDSLKAGGRG ATGTRTQTRY RQLLIATQFA LALMLLAGAI FFVRGLEKLI GARKGWNPMP VVSGVINLAS PTRFGSAEPI LAFHAQLRDR LLALPGVKNA CVSFDLPLFN SPSRRNFLVE GRPAPAAGQE IAAFTNGVSP GFLDTMGLHL LRGRFIDNTD RLGSRPVVVI NETMARTLFS GEEAVGHRLA QAGGDKPVWA EIVGVVEDTR ALDMAPSPVR FQVYKPFAHE AWQFVTIAVR VADPAKSAAL LEPIRQTVAA LDPDQPVLRL MTVPQRIESN FKVWETIDRL LMVFAGLGLL LAALGIYGVV TRVVTQRTPE IGIRLALGAQ IRDIVGLVLG GGVRLAFAGT LLGSIGAACL LQFTSQALPA FGRVEPVTIV LSAVALVSLP CSPACFRPAA LRASTLRWPC GPSDRCHERR SARHTMLGMT SASADRCRTW RSPEG
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