| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1893 |
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| Symbol | |
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| ID | 6206810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2368002 |
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| End bp | 2370419 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691541 |
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| Product | permease |
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| Protein accession | YP_001818776 |
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| Protein GI | 182413710 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.628552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.326735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTCC GCCTCGCGCT GCGCGCCCTG CTGAAATCCC CCGGCTACAC CACCATCGCG
CTGCTCACGC TCGCGCTCGG CATCGGCGTG AACACCTCGA TGTTCAGCCT TGTCGACGCG
CTGCTGTTCC GCAGCACGCC GTTTCCCGAT TCCGCGCAGC TCTACGAGGT GGTCGCTTCC
AGCCCCACCT TCGAAGCGCG CCGCTATTCC TACCTCGAGC TACGCGAGAT CCGCGAACAG
CTCACCGCTT TCCCGGCGCT GACCACGCTG GTGCACAGCC AATACACCGT CTCCGAACCC
GGCCAGCCCG CCGAGCGCAT CGGCGGCATC ATGGTCTCGG AGGATTTCTT CGCCACCTTC
CGCGTCCCGC CGCTCATCGG CCGCGTGTTC TCGCCCGAGG AACACCAGCC CGGTCGCAAC
GACGTCATCC TGCTCAGCTA CGCGTTCTGG CAAACCCGCT TCGGCGGCGC GACCGACGTG
ATCGGCCGCA CGCTGCGGCT CGACGGGCGC ACGACCACCA TCATCGGCGT GATGCCGCCC
GCATTCGACT ATCGCATGCT CTGGGGCGGC GCGGCGTTCT GGCGTCCGCT CAACTTCACG
CGCGACCAGA TCGAGTGGCG CGATTACCGC GTGTTCAGCT TGATCGGCCG GCTGCCCGCG
ACCTCGCCCG CCAGTCGCGT CGCCGCCGAG CTCGCCCCCG TGGGCGCGAC CCAGGAAAAG
CTCTTCCCCG AATCCTACTC CGGCATCCGC TATCACGCGG TCCCGCTCCA CGAGGCGCTG
ATGGACACGC TCGGCCGCCG CGTCTCGCTG CTGCTGCTCG GGCTGTCCGC GTTCGTGCTG
CTCATCGCCT GCGCCAACCT CGCCAACCTG CAGCTCGCCC GCGCGACCGC CAATGTCCGC
GATCTCGCCA TTCGGGCCGC GCTCGGCGCC TCGCGCCGGC GGCTGATTTA TCAACAGCTG
GTCGAGTCGG TCCTGCTCAG CCTCGCCGGC GGCGCGCTGG GCGTCGGGCT CGCGCTCGTG
CTGAACCGCG TCATCGAAAC CAACTTCGTC ATCAGCGGTT CGACCGGCGC CGTGCACATC
CGACTCGATC CGCGCGTGCT CGCCGCGACG CTGCTCGTCT CGCTGCTCAC CGGCCTGTTG
TTTGGCATCG TGCCCGCGTG GCTCGCGTCG CGCACCGACG TGAACACCGC GCTGAAACAA
CAGACGCGCG GTGGCACCGC CGGTCGCGGC CACCATCGCA TTCGCCAGAC GCTCGTCGTC
GCCGAGGTCG CGCTCGCGCT CGTCCTGCTC AGTGGCGCCG CCATTCTCCA ACGCGGCTTC
GCCGACCTGC TCGATCGCCA CACCGGGTGG GACACGGATC ACATCATCAC CGCCGCGCTG
CCGATCCCCG AAACCCGCAC CGAATACGAA ACCGAGGCCA AACGCGCCGA ACTCTTCCGA
CGACTCGAGG AACGGCTCGC GCGCATTCCC GGTGTCGAAC AGGCCGCCAT CGCCACGTCC
CTGCCGGTCT TCACCTACAA CGGCGATCGC CGGGTCTTCA TCGACGGCCA GTCACAGATG
GATCCGAACC TGCCGGCCGC GTTTCACGTC ATGGCCTCCG CGAATTACTT CGCGACGATG
GGCATTCCCC TCGTCGAGGG CCAGCTCTAC GCGCCCGACA TCAAGGTGAC CGATCCGCGC
GTCATCCTCG TCAACGAAGC GCTCGCGCGC CGGCTCTGGC CCAATGACAC GGCCGTCGGC
AAGCGGCTCG CCAGCATGGA CAGTGGCAAA CCTTACTGGG CGGAGATCAT CGGCGTCGTG
CGCGATGTCG ACACCGCCGC CAGCACGCGC GACCCGTCGA CGCCGTATCA GGTTTACAAG
CCTCTCGCGC AGGAAGCGTG GGGGTACGTT CACTTGGTCC TCCGCAGCCG CACGCCCGAG
GCGCTCGGCG AAACGCTCCG CCGCGCGGTG TCCGACTTCG ATCCCGACCT CGCCGTCGCC
TACACGGGCA CGGTACAGCA GCTGGTCGAC AGTCAGCAGC ACAACCTCCG GCTCGCCGGC
AAGACGCTCA CGGCGTTCGC CGTTCTCGGG CTCGCGCTCG CCGCCGTCGG ACTTTACGGC
GTGATCGCTC ATGTCGTCGC GCAACGCACC GGCGAGTTCG GCATCCGCCT CGCGCTCGGC
GCCCAGCCGC ACGACGTGCT TCGGCTGGTC CTCGCCCAGG CGCTGCGGTT GACCGGCGTC
GGACTCGTGC TCGGCATCGT CGGGGCGTTC GCGCTCAGCC GCGTGCTGTC CGGTCTGATG
CCGCGCGTGG TCTCGCTCGA TCTGGTCGCG CTGCTCGGCG TCGCCGCCGT CCTCTTGGTC
GTCGCGATCA TCGCCAGTTG GATTCCCGCC CGCCGCGCCA CCAAGGTCGA CCCGCTCATC
GCGCTCCGCG CGGAGTGA
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| Protein sequence | MPVRLALRAL LKSPGYTTIA LLTLALGIGV NTSMFSLVDA LLFRSTPFPD SAQLYEVVAS
SPTFEARRYS YLELREIREQ LTAFPALTTL VHSQYTVSEP GQPAERIGGI MVSEDFFATF
RVPPLIGRVF SPEEHQPGRN DVILLSYAFW QTRFGGATDV IGRTLRLDGR TTTIIGVMPP
AFDYRMLWGG AAFWRPLNFT RDQIEWRDYR VFSLIGRLPA TSPASRVAAE LAPVGATQEK
LFPESYSGIR YHAVPLHEAL MDTLGRRVSL LLLGLSAFVL LIACANLANL QLARATANVR
DLAIRAALGA SRRRLIYQQL VESVLLSLAG GALGVGLALV LNRVIETNFV ISGSTGAVHI
RLDPRVLAAT LLVSLLTGLL FGIVPAWLAS RTDVNTALKQ QTRGGTAGRG HHRIRQTLVV
AEVALALVLL SGAAILQRGF ADLLDRHTGW DTDHIITAAL PIPETRTEYE TEAKRAELFR
RLEERLARIP GVEQAAIATS LPVFTYNGDR RVFIDGQSQM DPNLPAAFHV MASANYFATM
GIPLVEGQLY APDIKVTDPR VILVNEALAR RLWPNDTAVG KRLASMDSGK PYWAEIIGVV
RDVDTAASTR DPSTPYQVYK PLAQEAWGYV HLVLRSRTPE ALGETLRRAV SDFDPDLAVA
YTGTVQQLVD SQQHNLRLAG KTLTAFAVLG LALAAVGLYG VIAHVVAQRT GEFGIRLALG
AQPHDVLRLV LAQALRLTGV GLVLGIVGAF ALSRVLSGLM PRVVSLDLVA LLGVAAVLLV
VAIIASWIPA RRATKVDPLI ALRAE
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