| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1892 |
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| Symbol | |
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| ID | 6204639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2365210 |
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| End bp | 2367606 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691540 |
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| Product | permease |
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| Protein accession | YP_001818775 |
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| Protein GI | 182413709 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.723684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.478639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTCG CTCTCCGTCA GCTCTTCAAA TCCCCGGGCT ATACCGCCGT CGCCGTCATC
ACGCTCGCCC TCGGCATCGG CCTGAACACT TCGATGTTCA GCCTGATGAA TCTGCTCATC
CTGCGGCCGC TGCCCTATCC GGCAAAGGAA CAGCTGGTCC GAATCTTCCG CACCACGCCG
CAGGATGCGC GCGGCAATCA CAACGTCCAA TCCTTCCTCG ATCTCCGCCG CGAGACGGCG
GCCTTCCTCA AGCTCGCGGC TTATCGCCAG TGGGGCTACA CGCTCACCCA GCCCGGCCGG
AGCCCCGAGA ACCTCAACGC CCTCCGCGTG TCCGCCGGCT TTTTCGAAAT CCTCGGGCTG
CAGCCCGAGC TCGGCCGCGT GTTCACGCCG GAGGAGGACC ACGCGGGCAA CCATGTCGTG
ATCCTGAGTT ACGCCGCGTG GATGGCGCAG TTCGGCGGCG ATCCGGGCAT CGTCGGCCAA
ACCGTGTCGA TCGACAGCGA GCCCACGACC GTCGTCGGCG TGCTGCCGGA GAAATTCGCT
TCGCTGTTTC TGTGGGGACC GTCCGACGTT TTCCGACCGT TGGCGCTGAG CGAACAGGAG
AAGGCCGACC GCGCCGACAC CTCCGTGCAG GTCCTCGGTC GCTTCGACCA AGGTCTCACG
CTCGCGCAGC TGAACACCCG ACTCGCCGCC ATTTACGCCA ACCTCGCGGA TTCCCGCCCG
CGCGAGCAGA GCAAGGACGG ACTGCGAGCG GTGGACCTGC AATCCTCGAC GATGCAGCCC
GGCACCGACG TCGCGACCCT GATGCTCCTC GGCCTCGCCG GATTCGTGCT GCTGATTGTC
TGCGGCAATC TCGCCAATCT CCAGATGGCC CGCGCCCTGT CCCGCACGCG TGAGTTCGCC
GTTCGCGCGG CACTCGGCGC CTCGCGCTCC CACCTGCTGC GACCGCTGCT GCTGGAGAGC
ACGATGCTCG CGCTGGCCGG CGGCGCGCTC GGGGTTCTCG TCACCGTCTG GGGCAACGCG
TGGATCTCCA GCCAGATCGC CCAGAATCTG CCGATCCATT TCGATCTGAC GATCGACTGG
CGGGTGCTCG TGTTCGCCTC CGGACTTTCG CTGCTAACCG GCATGTTCTT CGGGCTCGCC
CCGGCGTGGC TGTCCTCGCG CGTGGACGTG AACGACACGC TTAAGTCGGG CGGCCGGGCC
GCGACGGGTG ACCGCTCGCA GCACCGCTTC CGCGACGCGC TGATCGTGCT CCAATTCGCC
GCGGCCCTCA TTCTCCTCAG CGCCACCGGA TTCTTCATGC GCGGCATGCA AACGCTGCTG
GCGCGCGATC CGGGATGGAC GCCTGCCGGA CTCACCCACT GCGTGATCAA TCTCCCGGCG
GCGCGCTACG CCACGCCCCA GCAGGTCCTC GGTTTCTACG ACAACCTCGA GCAACGGCTG
CGCGCACTGC CTGGCGTCGA AAACGTCGGC ATCGGCTGGA CGGCCCCGCT CTACCAACTG
CTCGCCACGC GCACCTTCCT GGTCGAGGGA CGCGAACCGC CGGCCCCCGG CCGCGAACCG
CGCGCCTTCG TCAATGCCGT CAGCCCCACC TATCTCGAGA CCCTGCGGAT CCAGCTGCAG
GCCGGTCGAC AGTTCAGCGC AACGGATGCC CTTGGCGCCC CGCGCGTCGT GATGATCAAC
GAGGCGATGG CCCGCGCGCT CTTCCCGGGC GAGAATCCCA TCGGCCGGCA CCTCAGCACC
GGCGACGCCG GCAACCGCGC CTCAGCCGAG ATCGTTGGCG TCTTCCACGA TGTCGGGATG
GCCGGAAATC CCGCGCCGGC CACGACGCCG TTCCAGGTTT TCCAGCCCCT CGCGCAGGAA
CCGTGGAACT ACGTCACCGT GCTGGTGCGC GCACCGCACC CCGTCACCGA ACCGCTGCGA
CAGGCGGTCC AGGCCCTGGA TCCTACCATC CCCGTTCAGC TGCTGAACAC GGCCGACGAA
CTGGCCAAGA CTGGCACCCG CGCGCTCGAG CTTATCACCA CGATCTTTTT TGGCTTCAGC
CTGCTGGGCC TCTTCCTCGC CGCCCTCGGC CTTTATGGCG TGATCATGCG ACTCGTCGTG
CAGCGCACGC CCGAGATCGG CGTACGGATG GCGCTCGGCG CGCAGTGGCG CGACATCCTC
ACGCTCATCA TGGGCACCGG CTTCAGGCTC GCCGCCATCG GCGCGGGCGT CGGCCTCCTG
GGCTCGGTGG CCATGAGCCT GCTCTTGAGC GCAATGTTCG CGGGACAACC GAACATCGAT
TTCGTGATCC TACCCGTGAC CACCGCCGTA CTCGTGATCG TGGCGCTCAT CGCCAGCTAC
CTTCCCGCCC GTCGCGCCAC GAAGGTCGAC CCCATCGAGG CGCTCCGCGC CGAATAG
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| Protein sequence | MRLALRQLFK SPGYTAVAVI TLALGIGLNT SMFSLMNLLI LRPLPYPAKE QLVRIFRTTP
QDARGNHNVQ SFLDLRRETA AFLKLAAYRQ WGYTLTQPGR SPENLNALRV SAGFFEILGL
QPELGRVFTP EEDHAGNHVV ILSYAAWMAQ FGGDPGIVGQ TVSIDSEPTT VVGVLPEKFA
SLFLWGPSDV FRPLALSEQE KADRADTSVQ VLGRFDQGLT LAQLNTRLAA IYANLADSRP
REQSKDGLRA VDLQSSTMQP GTDVATLMLL GLAGFVLLIV CGNLANLQMA RALSRTREFA
VRAALGASRS HLLRPLLLES TMLALAGGAL GVLVTVWGNA WISSQIAQNL PIHFDLTIDW
RVLVFASGLS LLTGMFFGLA PAWLSSRVDV NDTLKSGGRA ATGDRSQHRF RDALIVLQFA
AALILLSATG FFMRGMQTLL ARDPGWTPAG LTHCVINLPA ARYATPQQVL GFYDNLEQRL
RALPGVENVG IGWTAPLYQL LATRTFLVEG REPPAPGREP RAFVNAVSPT YLETLRIQLQ
AGRQFSATDA LGAPRVVMIN EAMARALFPG ENPIGRHLST GDAGNRASAE IVGVFHDVGM
AGNPAPATTP FQVFQPLAQE PWNYVTVLVR APHPVTEPLR QAVQALDPTI PVQLLNTADE
LAKTGTRALE LITTIFFGFS LLGLFLAALG LYGVIMRLVV QRTPEIGVRM ALGAQWRDIL
TLIMGTGFRL AAIGAGVGLL GSVAMSLLLS AMFAGQPNID FVILPVTTAV LVIVALIASY
LPARRATKVD PIEALRAE
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