| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1890 |
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| Symbol | |
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| ID | 6206155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2361021 |
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| End bp | 2363558 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641691538 |
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| Product | permease |
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| Protein accession | YP_001818773 |
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| Protein GI | 182413707 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.485646 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATTC AAACGTTCTT CCAGGATCTG CGGATCGGTC TCCGCGTGCT CATCAAGGAA
AAGAGTTTTT GCACGCTCGC CGTCACCGTC CTTGCGGTCG GTATCGGCGC CGTCACGTCG
ATGTTCAGCG TCGTCAATGG CACGATGCTG CGCGGCTTTT CCTTTCCCAA CGCCGACCGG
CTCGCCGGCG TTCAGGTGGT CGATCCGACG CAGTCGAATC CGTTCGGCTT CAACAGCCAG
ATTTTCTCGC TCGATTACGA GGCGATGCGC GAGCAGCAGA CCTCGTTCGA GATGATGGCC
GCGTTCATCA ACGGCGCGAC CGTCAACGTC ACCGCTGATG GGACGCCCAA GCGCTACACG
GGCGCCTACG TCTCCGCCGA CTTTTTCCGG ATTCTCGGCG TGCGGCCGGT GATCGGCCGC
GATTTCGCGC CGCGCGACGA TCAGCCGGGC GCGGAGAAGA TCACGCTGAT CAGCTACCAA
CTCTGGCAGC GCGATTTTGG CGGCTCGCCC GAAGTGATCG GCCGCAGCAT CCGGATCAAC
GGCAAACCGG CGACCATCGT CGGCGTGATG CCCCAGGGCT TCGCCTTTCC GGTGAACGAG
GAGCTGTGGA TCCCGCTCTA CGCCGAGTAT CCGCCGACCC CGCGCAACAG CCCGAACGCG
CAGGGCAATC AGCCGGGCGT GCTCGCGCTG CTCAAGCCCG GCGTCAGCTT CGACCAGGCC
CAGGCCGAGT TCTCCGGCCT CGCCAAGCAG CTCGCCGCCG CGTTTCCCGA CACGAACAAG
AAGTTCGACA CGGCGGTGAT CCAGCCGCTG ATCAAGACCT TCACGCCGCC CAACATCAAG
GGCCTGCTCT GGACGATGCT CGGCTTCTGC GTCGGCCTGC TGCTCATCGC CTGCGTCAAC
GTGATGAACA TGCAGTTCGC GCGCGCGACG CTGCGCGCGA AGGAACTCGC GATCCGCTCC
TCGCTCGGCG CGACCCGGAT CCGGCTGATC CGGCAGATGC TGACCGAGTC GCTGCTCGTC
GCCGCGCTCG GCGCCACTGT CGGCATCGGC CTCGCTTCGT GGGCGACGGG ATACCTCAAC
GCCGCCACGC ACTCCGGCGA AAATCCCATT CCCGCCTACA TCGTATTCAA CATCGACGTG
CCCGTGCTCG TCTTCGTGGT CAGCGCCACG ATGCTCGCGG CGCTCGTGTC CGGATTCGTT
CCCGCGTGGA TGTCCTCGCG CGCCAGCGCC GTCGACGCGT TGAAGGAGTC CGGCCGGGGC
AACACCAGCC GCGCCGTCAC CGTCATCACC CGCTCGCTGG TCGTCATGCA GATCCTCGTC
AGCAGCCTCT TGCTGGTCGG CGCGCTGCTC CAGCTGAAAT CAATCCTGCG CCAGAACCAG
ATCGCCTGGG GCTACGACAA CGGGGCGATC CTGAGCGCGC GACTCGCCCT GATGGAGGGC
GACTATCCAA CGCCCGAGGC GCGAAAACTG TTTTTCGACC GGCTGCTCCG TGAGCTGCGC
GCGAATCCCG AATACGAGGG CGCCGCCCTT ACCAACCGCT TCCGGATGAC CTTCTCCGGC
TTTGGTCGCA TCGAGATCGA CGGCCGCGCC TACGCCAAGG ACGAGGACCG GCCGAACACC
AACTTCGAGC AGGTGTCCGA AGGCTACTTC GAGACGCTCA AGGCGCGGAT CATCGAGGGC
CGCGACTTCG CACTCGACGA CACCGATGCC AAGCAGCCGA TCGCCATCGT GAACGCTGCT
TTCGCGCACA AGCACTTTGG CAATGAGAGC GCGCTTGGCC GTCGCTTCCG CACCGTCGGC
AACAACGGCC AGCTGTTCGG ACCGTGGCGC ACGATCGTCG GCGTCGTCTC CAATGTCCGG
ATGCTCGGGC CGTTCAACAA TCCGCAGGTG GACGACACCG GGTTCTACGT GCCGTATTTC
TCGTCCGTCT TCGGTCCGGC CCTGCCCGGC CCGGTGCAGC AGCAGTTCGC CACCGTCATC
GTGCGGCCGC GGGCTAACAA TGCCGCGGAC ATCGAGCGGC GCGCCGCCGT CCTGGCGACC
ACGCTCCAAC GCGAGGTCAA CAAGGTCGAC GCCAACCTGC CGCTCTACTT CGTCGGCACC
GCGCGGGTGA ACCAGGAGAG CTTCCTCGGC GTGAACCGGA TTATCGCCAG CATGTTCACG
CTCTTCGGCG GCATCGCCGT GCTGCTCTCG TCGGTCGGCC TCTACGGCGT GATGAGTTTC
TCCGTCAACC AGCGGATGCA GGAATTCGGC ATTCGCATGG CGCTTGGCGC CGACACCCAG
CGGATCCTGC AGATGGTGCT CCGCCAGGGC GGCGTGCAGC TGCTCATCGG ACTGGGGGCT
GGACTCGCAC TCACCGCCAC CGTCGCCGTG CTCGCCCGCG ACGGCATCGC CACGCAGCTG
TTCGAGATCA GCCCGCTCGA TCCGCTCACC TACACGACCG TCGCGCTGCT GCTCACCGCC
GTGGCGTTTG TCGCCACGCT CGTGCCCGCC CAGCGCGCCA CGCGCGTCGA CCCGATGACC
GCGCTCCGGG CCGAGTAG
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| Protein sequence | MLIQTFFQDL RIGLRVLIKE KSFCTLAVTV LAVGIGAVTS MFSVVNGTML RGFSFPNADR
LAGVQVVDPT QSNPFGFNSQ IFSLDYEAMR EQQTSFEMMA AFINGATVNV TADGTPKRYT
GAYVSADFFR ILGVRPVIGR DFAPRDDQPG AEKITLISYQ LWQRDFGGSP EVIGRSIRIN
GKPATIVGVM PQGFAFPVNE ELWIPLYAEY PPTPRNSPNA QGNQPGVLAL LKPGVSFDQA
QAEFSGLAKQ LAAAFPDTNK KFDTAVIQPL IKTFTPPNIK GLLWTMLGFC VGLLLIACVN
VMNMQFARAT LRAKELAIRS SLGATRIRLI RQMLTESLLV AALGATVGIG LASWATGYLN
AATHSGENPI PAYIVFNIDV PVLVFVVSAT MLAALVSGFV PAWMSSRASA VDALKESGRG
NTSRAVTVIT RSLVVMQILV SSLLLVGALL QLKSILRQNQ IAWGYDNGAI LSARLALMEG
DYPTPEARKL FFDRLLRELR ANPEYEGAAL TNRFRMTFSG FGRIEIDGRA YAKDEDRPNT
NFEQVSEGYF ETLKARIIEG RDFALDDTDA KQPIAIVNAA FAHKHFGNES ALGRRFRTVG
NNGQLFGPWR TIVGVVSNVR MLGPFNNPQV DDTGFYVPYF SSVFGPALPG PVQQQFATVI
VRPRANNAAD IERRAAVLAT TLQREVNKVD ANLPLYFVGT ARVNQESFLG VNRIIASMFT
LFGGIAVLLS SVGLYGVMSF SVNQRMQEFG IRMALGADTQ RILQMVLRQG GVQLLIGLGA
GLALTATVAV LARDGIATQL FEISPLDPLT YTTVALLLTA VAFVATLVPA QRATRVDPMT
ALRAE
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