| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1888 |
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| Symbol | |
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| ID | 6206000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2355927 |
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| End bp | 2358359 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691536 |
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| Product | permease |
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| Protein accession | YP_001818771 |
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| Protein GI | 182413705 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.712719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGC TCCGTCACGC TCTCGTGTCC CTGATCAAGA CTCCGGGGTT CACGCTCGTC
GCGCTGATCA CCCTCGCACT CGGCATCGGC GTGAACACCT CGATGTATAC GCTCGTCGAC
GTGTTGCTGT TCCGCAGCGC GCCCTACCCG GAGCCCGATC GCATGCTGCT CATTCAGGCG
CTCAATGCGC AGGGCCAGCC TGACGGCTAC GGCTTCCCGG AGGTCGAGGA ACTGCGCGTC
CAGGTGGCGA ACGGCGAACA TGCCGCCTTC GAATCGGTCA CGACGCTCGC CGGGTGGAAC
AATGCCTGGG CCGAACCCGG CCAGCCCGCC GAGCGGCTCC GCGCCGTCGA CGCGTCCGCC
GAGTTCTTCT CGACGTTTCG GGTGCAGCCG ATGCTCGGCC GCGCGTTCAC CGCCGACGAG
GAAACGCCCG GCCGCAACCA GGTCGCGATC CTCAGTCACT CGTTCTGGCA GAGCCGGCTC
GGCGGCGATC CCAACGTCAT CGGTCGCACG CTCCGGCTCA ACGCGGAGCA GGTCACCATC
ATCGGCGTCA TGCCCGCCAG CTTCCGCTAT CCGCTGTTCT TCGGCCCCGT TGATCTCTGG
CGCCCGATCA CGTTGCCCCA GCACATCGTG CAGGATCGCA CCAACCGGCT TTTCTTCGCC
ATCGGCCGGC TCGCTCCGGG CATGACGGTC GAGCAGGCCA CGGCCCAGGC GCAGCCGGTG
TTCGCTCGCT GGGCCCAGGA CTATCCGCAG CACAGCGCCG GCCGCACGGT CCGGCCCGAG
CCGCTGCACA AGGTCGTTAT GGACAGCACA GGGCGGTTCA TGATGTGGCT GCTGTGCGGC
GTCGGCATCG TCGTGCTGCT GATCGCGTGC TTCAACCTCG CGAATCTCCA GCTCGCCCGC
GCCGCCGCGC GCACCCGCGA TCTCGCCATC CGTTCCGCGC TCGGCGCCTC GCGCGCCCGG
CTCATTCTTC ACCAGCTCAC CGAATCCATG CTGCTCGCGC TCGCCGGCGG CGGCTTGGGC
GTGCTGGTCG GCATCTGGAT GAACGCCCTC CTCGAGAGCC AGATCCAGAT CGGCGGGACC
GAGCATCTCA CCTTGAACCT CGATGTGCCG ATCCTGCTGC TCACGCTGCT GGCCGCCGTG
TTCAGCGGCC TGGTGTTCGG ACTCGTGCCG GCCTGGATGG CGTCGCGGGG CGATGTGGTC
AGCACGCTCA AGCAACAGAC CCGCGGCTCC AGCTCGAGCC GTTCGACGCA CCGGTTCCGC
CATAGCCTCA TCGTCGCGCA GGTCGCGTCG GCCCTCGCGC TGCTCGCCAC CGCCGGCGTG
ATGCTGCGCG GGTTCAATGC GCTGCTCCAC GCCAACAATG GCTGGGACAC CGATCGCGTG
CTCGCCGCCA ACATCCATCT GCCCGAACAG TCGACTTACA ACAGCGAGGA CAAGCGCCGG
CTCGCGATCG AGAAACTTGC CCGCCGGCTC AAGCAGATCC CGCAGGCGGA AAGCACCGGC
ATCGCGTCGA CGGCTCCGTT GTTCGGCTAT TCCAAGAGCG TCCCCATTCA GGTCGACGGC
CAGACCTCCG ACGATCCTGC CAAGCAACCC GTCGGCGGCT ACACGCTGGT CGCGTCCGAC
TATTTCCAGA CCATGGGGAT CCCGCTGCTC GAGGGCCGGT TGTTCCCGGA GGAGCTCAAC
GCCAGCTCTC CGCCCGTCGT CATCATCAAT GAAACGATGG CGCGGCATTT CTGGCCCGGC
CAAAGCGCAC TCGGCAAACG CATCGGCGAT CGGCAGGACA ACGTCCTCGT CTGGCGCGAG
GTGATCGGCG TGGTGCGCGA CATCGGCTTC GCCGTGCAGC TCAGCAATCC GGACACGCTG
TTCCAGGTCT ACAAGCCGAT GGTGCACGAG CCGTGGGGCT ACATGTTCCT GCTGGTGCGA
GGCCCTTCGC CCGCCACGTT CAAGAATGAA GTCCGTCGCG CCGTGGCGGA CATCGATCCC
GACGTCGCCG TCCAGGAGCT CTACACGATT CCGGAGGCGA TCGACCGCTA TTCCCACAAC
ATCGTGCTGG TGAATCAAAC GATCGGCGCG TTTGCGTTGC TCGGCGTGCT GCTCGCCTCG
GTCGGACTTT ATGGCGTGAT CTCGAATCTC GTGGCGCAGC GCACCGGCGA GTTTGGCATC
CGGCTGGCGC TCGGCGCGCG GCCGCGCGAC GTGCTCACGC TCGTGCTCCG CGGGGGCATG
ACGCTCACCG CGATCGGACT CGGCCTCGGC GCCGTGGTGG CCTACGCACT CAATCTCGTG
CTGCAGGGCT TCATGCCGCG GATGGCCGCA TCGGATCCGC TCACGATCGC GCTGGTGGCA
GTGCTTCTGT TCTCGGTCGC CGTGTTCGCC TGCTGGCTGC CCGCGCAACG CGCCACGCGC
ATCAACCCGC TCGATGCCCT CCGCGCGGAA TAG
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| Protein sequence | MSTLRHALVS LIKTPGFTLV ALITLALGIG VNTSMYTLVD VLLFRSAPYP EPDRMLLIQA
LNAQGQPDGY GFPEVEELRV QVANGEHAAF ESVTTLAGWN NAWAEPGQPA ERLRAVDASA
EFFSTFRVQP MLGRAFTADE ETPGRNQVAI LSHSFWQSRL GGDPNVIGRT LRLNAEQVTI
IGVMPASFRY PLFFGPVDLW RPITLPQHIV QDRTNRLFFA IGRLAPGMTV EQATAQAQPV
FARWAQDYPQ HSAGRTVRPE PLHKVVMDST GRFMMWLLCG VGIVVLLIAC FNLANLQLAR
AAARTRDLAI RSALGASRAR LILHQLTESM LLALAGGGLG VLVGIWMNAL LESQIQIGGT
EHLTLNLDVP ILLLTLLAAV FSGLVFGLVP AWMASRGDVV STLKQQTRGS SSSRSTHRFR
HSLIVAQVAS ALALLATAGV MLRGFNALLH ANNGWDTDRV LAANIHLPEQ STYNSEDKRR
LAIEKLARRL KQIPQAESTG IASTAPLFGY SKSVPIQVDG QTSDDPAKQP VGGYTLVASD
YFQTMGIPLL EGRLFPEELN ASSPPVVIIN ETMARHFWPG QSALGKRIGD RQDNVLVWRE
VIGVVRDIGF AVQLSNPDTL FQVYKPMVHE PWGYMFLLVR GPSPATFKNE VRRAVADIDP
DVAVQELYTI PEAIDRYSHN IVLVNQTIGA FALLGVLLAS VGLYGVISNL VAQRTGEFGI
RLALGARPRD VLTLVLRGGM TLTAIGLGLG AVVAYALNLV LQGFMPRMAA SDPLTIALVA
VLLFSVAVFA CWLPAQRATR INPLDALRAE
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