| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1887 |
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| Symbol | |
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| ID | 6207832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2353377 |
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| End bp | 2355806 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691535 |
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| Product | permease |
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| Protein accession | YP_001818770 |
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| Protein GI | 182413704 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.556655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.69487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCCG ACCTTCGCTT CGCCCTTCGC CAGTTGATCC GGCGCCCGGG CTTCACCCTC
ACGGCCGTTG TTTCCTTCGC GCTCGGTATC GGGCTCGTCG CGACCCAGTT CAGTCTCATC
GATGCAGTGC TGCTGCGTGG CATGCCGCTG CCGGCCGCCG ACAGCCTGTA TCACATCGCC
TGGCAGGCGC CCAAGAGCAG CGACTCTGAT CGTTGGGAGG TGATGTCGTA TCGCGACTAT
CTTCTAGTAC GCGAGCGACA GACCTCCTTC GAAAGCCTGG CGGCCACGCA GTGGCTCGGG
ATGAACCTGA GCGGGCCTCA GCGCGTGCCG TCGCGCCACA CGGGTATTCT GGCTAGCGCC
GATCTGCCTG GTGTCGCGCG CACGCAGCCG ATGCTGGGTC GCTGGTTCTC CGCCGAGGAG
GATCGGCCCG GCCAGCCGTT GTTCATCGTG CTATCCCACG TGCTGTGGCA GGAGCAGTTC
GCCGGCTCGC CCGGAGCACT CGGCCGCAAG GTCAACATCA ACGGCGAGCC CGGCACGATC
ATCGGCATCA TGCCGCCGAA ATTCCAGTTT CCCGGCTCCG CCGAGCTCTG GATCAACCTG
CGTGCCACGC CGAACGATCC ACGGCAGCGA CTCATCGATC GCGTGGAGTT GTTCGGCCGT
CTCAAGCCCT CCGTCAAACC CGCGCAGGCG CGCGCCGAGC TCGACACGCT CGCCGCCAGC
TGCGTGCAGC TCTGGCCGGA AACCAACGCC GGCTACAATC GCGCCAACCT TTTGACCGTC
GCCAACGCCT ACTCCGGCGG CGGCGCCCGG CCGCTGCTTT TCCTGATGCT GGCCATGACG
GTGTTCATTC TCGTGCTCGC CTGCGTCAAT GTCGCCACGA TGCTCCTTGG CCGCGCTGCC
CGGCGCACCC GCGAGTTCGC CGTCCGCGCC GCCGTCGGCG CCGGGCGCAC GCGCCTGCTC
CTCCAGATGC TGCTCGAATC GTTTCTCCTC GCAGCGCTTG GTTGTCTCGG CGGGCTGCTC
GTCGCCCGCT TGGGCGTTGA TTTTCTCCAA GACTACCTGG TGCACCAACG GGCCGTGCCG
GACTGGATGG ACTTCCGCCT CGACCAGCGC GTGCTCGTCG TCGCCACGGT CTCCACCCTG
CTGGCCGGCA TCCTCGCCGG CATCGTGCCC GCGTGGCAAT CCTCGCGGAT CGATGTGAAC
ACCGCGCTCA AGGACGACGC CCGCGCCGCC ACCGGCATCG GCGTCGGCCC GCTCGCGCGC
TGGCTCGTGT CCGCGCAAAT CGCATTCTCG ACCGCGCTGC TCGTCGCGGC CGGCGTGCTG
AGCCTCACCG TTTATCTGAC CCGCCACGCC AATCTCCGCT ACGAGCCCGA CAAGCTCCTC
ACCGGCCGGA TCGAATTGCA GGATGGCACC CAGCCCACGC CGGCGGATCG CGCGCGCTTC
TATCGCCGGC TGCTCGAGCG GCTGCAGTCC GAACCAGGCG TGGAATCCGT CGCGGTCACC
AGCCGCAATT TCATCGGCTC CGGCGTCCCG ACGCAGATCG AGCCGGAGGG CGTCACCTAC
GCTAATCCCA ACGAGCGACC CGTGGCATGG CTGGAAGTCG TCTCGAACGA GTACTTCCGG
CTGATCTCGG TCCGCCCCAT CGCCGGGCGG CTCTTCGACA ACCGCGAACA AACCCTCACC
GACACGCGTT CCGCTGTCGT CAACGAATCC TTCGCCCGCC GGTTCTGGCC CGGAGAGGAC
GCGCTGGGCC GGCGCTTCCG CACCAACCAA ACCGACGAGA ACTGGGCCAC CGTCGTCGGC
GTCGTACCCG ACCTGCAGAT GCAGGGACTC TTCGAGGAAC CCGGCCGCAA CGAAGCGGGT
TTCTACCTCG CCCAGGATCA GATGGGCTGG GGCTGGCTCG ATCTCTTCAT TCGCACGAAA
TCGGACCCGC TGCAGTTGCT CGATCCGGTT CGCCGCGCCA TCGCCGCCAT CGATCCCGAC
CAGCCGATCC ATTCCGTGGG TACGCTCACC AGCCAGACCG CTCAAGCGAT GCGTGGCTTC
AACATCCTCG GCATCCTCGC GGCGGTGTTT GCGCTCATCA CGCTCTTCCT CGGCGCCGTC
GGCGTCTACG GCGTGACCTC GCAGGCCGTG AGCCGCCGCA TGCGGGAATT CGGCATCCGC
ATGGCACTCG GCTCCACCGT CAGCCAGTTG TTGCGCTTGG TTCTGCAGCA GGGCGGCAGA
CAGATCGCGC TTGGTCTCGC CGTTGGGCTC GTCGGCGGAT TCCTGCTGTC GCGGCCACTG
GAACAGATCT TCGGCAGCTC CATGGCCAAC AACCCGCTGA TTTATGTCGG CGTCATTGTC
GCGATTTTTG CCGTCGGTCT GGCCGCCCTG TGGCTGCCCG CGCGTCGCGC CTCCCGGGTC
GATCCCATGA TCGCGCTGCG CTCCGAGTAG
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| Protein sequence | MRSDLRFALR QLIRRPGFTL TAVVSFALGI GLVATQFSLI DAVLLRGMPL PAADSLYHIA
WQAPKSSDSD RWEVMSYRDY LLVRERQTSF ESLAATQWLG MNLSGPQRVP SRHTGILASA
DLPGVARTQP MLGRWFSAEE DRPGQPLFIV LSHVLWQEQF AGSPGALGRK VNINGEPGTI
IGIMPPKFQF PGSAELWINL RATPNDPRQR LIDRVELFGR LKPSVKPAQA RAELDTLAAS
CVQLWPETNA GYNRANLLTV ANAYSGGGAR PLLFLMLAMT VFILVLACVN VATMLLGRAA
RRTREFAVRA AVGAGRTRLL LQMLLESFLL AALGCLGGLL VARLGVDFLQ DYLVHQRAVP
DWMDFRLDQR VLVVATVSTL LAGILAGIVP AWQSSRIDVN TALKDDARAA TGIGVGPLAR
WLVSAQIAFS TALLVAAGVL SLTVYLTRHA NLRYEPDKLL TGRIELQDGT QPTPADRARF
YRRLLERLQS EPGVESVAVT SRNFIGSGVP TQIEPEGVTY ANPNERPVAW LEVVSNEYFR
LISVRPIAGR LFDNREQTLT DTRSAVVNES FARRFWPGED ALGRRFRTNQ TDENWATVVG
VVPDLQMQGL FEEPGRNEAG FYLAQDQMGW GWLDLFIRTK SDPLQLLDPV RRAIAAIDPD
QPIHSVGTLT SQTAQAMRGF NILGILAAVF ALITLFLGAV GVYGVTSQAV SRRMREFGIR
MALGSTVSQL LRLVLQQGGR QIALGLAVGL VGGFLLSRPL EQIFGSSMAN NPLIYVGVIV
AIFAVGLAAL WLPARRASRV DPMIALRSE
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