| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1885 |
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| Symbol | |
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| ID | 6206640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2347700 |
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| End bp | 2350231 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641691533 |
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| Product | permease |
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| Protein accession | YP_001818768 |
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| Protein GI | 182413702 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.47484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCG TTCTTTCCCG CGTCGCCTTC ACGCTCGGCA CGATCGGCAT CGATCTGCGG
ATCGGCGCGC GCATGCTGGC AAAGGAAAAA GCCTTCTGCG CCATCGCCGC TGGCGTGCTC
GCCCTCGGCA TCGGCGCCGT CACGACGCAG TTCGCCGTCG TCAACGGCGT CCTGCTGCGC
GGGTTCTCGT TCCCCGACGC CGACCGGCTC GTCACCGTGC AGTTTGGCCA GTCCACGACC
GAGCTCGAAG CGCTGGTGCC ACGGATCATG CCGGCCGATC TGCTCGACCT GCAGGCGCGG
CAAATGTCCT TCGACTCGCT CGCCGGCTGG CTCCTGTTTT CGGCGGCCAA CGTCAACCTC
AACGGTGCGA CCGAGCGCCG CGCCGCCGGC TATGTCACCC ACGATTTCTT CCGCATGCTC
GGCATCCGCC CCGTTCTCGG CCGCGATTTC ACGGCGGAGG ACGATCGCGA TGGCGCCGCG
CCCACCATCA TCCTCGGCGA TGCGCTCTGG CGCGAGCTGT TCGAGTCCGA TCCCAACGTG
ATCGGCCGCT CGCTTCGCGT GAACGGCCGC GTCGGCACGA TCATCGGCGT CATGCCGCGC
GGATTTGCGT TCCCCTACGA CGAACAGTTG TGGATTGCGC TCCGCACGGA GTCGCCGGTG
CGTCCGCGGC ACGAGCACGC CAATCGCCCC GTCATCGTCT ACGGGCGGCT CAAGCCCGGT
GTGACGCTCG CTCAGGCCAG CGCCGAGGTC AGCTTGATTG CCGCGCAACT CGCCAAGGAG
CATCCGGAGA ACGCTGCGCT CAAGACCGGC CAGGTGCAGC CGCTGCTCGC CGCGTTCACC
ACGCCCCGCA GTGCCGGGCT GCTCTACACG CTGCTCGCGT TCAGCCTCGG CGTGCTGCTG
ATCGCGTGCG TCAACGTCGC CAACATGCAG TTCGCGCGCG CCACGCTCCG ACTACGCGAG
CTGGCGATCC GCGCTTCGTT CGGCGCGACC CGCGCCCGGT TGCTGCGCCA GCTGCTCACC
GAAAACCTGC TGCTCGCGCT CGTTGGCGCC GCCCTCGGCA CACTCCTCGC GCTGTGGACC
GTCGGCTGGC TCGACAGTGC CGTTCGCGCG TTCCGTCCAC CGCTGCCCGG CTGGATGCGA
TTCAGCATCG ACGGCCCCGT GCTCACGACA ATTGTCGCCG CCACGCTATT CGCCACGGTG
GGCTCCGGTT TGCTGCCGGG CCTGATGGCA GCCCGCGTCG GGCTGGCCGC CGAATTGAAG
GAGGGCGGCC GCGGCGCCAC CAGCCGGCGC ACCGGCGTGA TCGCCCGCGT GTTGGTCGTG
CTCCAGATCG TCGTCACGTG CATTCTGCTG ATCGGCTCAC TGCTGCAGCT CCGCTCGATC
GAACGTCAGC AGCACATCGA CCACGGCTAC GATCCGACTG CCGTCATGAG CGCCCGGTAT
ATGCTGATGG CCGGCGATCA TCCCACCGAG GCGGCACGGA TCGCCTTCAA CGAAAAAGTG
CTCGCCGAAT TGCGCGTGCA CCCGTCGCTC GCGTCCGCCG CGTTCAGCGA ACGCTACCGC
ATGATCTCGG TGCCGGAAGG CCCGGTGGAG ATCGAGGGCC AGACCGCCGC CGATGAAGCC
AGCCAGCCGA TCGTCGCGTC GGAGCGGATC ACCGACGGCT ACTTCGCCAC GCTAGGCCAA
CCGATTCTCG CCGGCCGCGA TTTCAGGCCG GAGGAGAGCG ATCTGAAACT GCCGGTGGCG
ATCGTGAACG CCACGTTCGC CCGACTGCAT TTCCCGAATG GCGATGCGCT CGGCCGGCGT
TTCCGCTCGG TGAATCCGAA TCCGAAAACG CCGGAGCCGT GGCGGGTCAT CGTCGGCATC
GTCGCCGACG TGCGGATGTC CGGCCCGTTC GACAGCCGCG CGCACAACTC CGGCTACTAT
CTGCCGTTCA CCTCCAATCT CTACAATCGC GGCCAGCCGA CGCTGAGCGG GATGTCCTAC
GTGACCGTGA TCGTCCGGCC GCGCGACGGA ATTCGCGCCG AGGCGAGCCT TCAGGCAATC
CGCGAGGCGG TCGCCAAAGT CGATCCAGAC ATGCCGATCT ACTACACCGG CACGCCACAG
GCGCAGTTTG AAACCTACCT TGGCCAATCG CGGCTGATCA CGCTGCTGTC ACTCGCCGTC
GGCATCATCG CCGTGGCGCT CGCCGCCGCC GGGCTCTACG GCGTCACCGC CCACGCGGTC
AATCGTCGCC GCCAGGAGTT CGGCATCCGG CTCGCGCTCG GCGCCGATCG ACGTCAACTG
CTCACGCTCG TCCTGCGTCA AGCCGGCCGG CAAGTCGCGC TGGGACTCGT ACTCGGACTC
GCCGCCACCG GCGCGATCGC GCTGACCGCG CGCTCCGCGA TTGCCGGCGC GTTGTTCGAA
ACCAATCCGT TCGACCCGCT CACCTACGCC GCCGTCGCGC TGCTACTCGG AGGGATCGCG
CTCCTCGCCA CGTTCCTGCC AGCGCGACGC GTCACCAAAG TCGATCCGAT GATCGCGCTG
CGGGCGGAAT GA
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| Protein sequence | MPSVLSRVAF TLGTIGIDLR IGARMLAKEK AFCAIAAGVL ALGIGAVTTQ FAVVNGVLLR
GFSFPDADRL VTVQFGQSTT ELEALVPRIM PADLLDLQAR QMSFDSLAGW LLFSAANVNL
NGATERRAAG YVTHDFFRML GIRPVLGRDF TAEDDRDGAA PTIILGDALW RELFESDPNV
IGRSLRVNGR VGTIIGVMPR GFAFPYDEQL WIALRTESPV RPRHEHANRP VIVYGRLKPG
VTLAQASAEV SLIAAQLAKE HPENAALKTG QVQPLLAAFT TPRSAGLLYT LLAFSLGVLL
IACVNVANMQ FARATLRLRE LAIRASFGAT RARLLRQLLT ENLLLALVGA ALGTLLALWT
VGWLDSAVRA FRPPLPGWMR FSIDGPVLTT IVAATLFATV GSGLLPGLMA ARVGLAAELK
EGGRGATSRR TGVIARVLVV LQIVVTCILL IGSLLQLRSI ERQQHIDHGY DPTAVMSARY
MLMAGDHPTE AARIAFNEKV LAELRVHPSL ASAAFSERYR MISVPEGPVE IEGQTAADEA
SQPIVASERI TDGYFATLGQ PILAGRDFRP EESDLKLPVA IVNATFARLH FPNGDALGRR
FRSVNPNPKT PEPWRVIVGI VADVRMSGPF DSRAHNSGYY LPFTSNLYNR GQPTLSGMSY
VTVIVRPRDG IRAEASLQAI REAVAKVDPD MPIYYTGTPQ AQFETYLGQS RLITLLSLAV
GIIAVALAAA GLYGVTAHAV NRRRQEFGIR LALGADRRQL LTLVLRQAGR QVALGLVLGL
AATGAIALTA RSAIAGALFE TNPFDPLTYA AVALLLGGIA LLATFLPARR VTKVDPMIAL
RAE
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