| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1878 |
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| Symbol | |
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| ID | 6206354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2337433 |
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| End bp | 2339886 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641691526 |
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| Product | permease |
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| Protein accession | YP_001818761 |
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| Protein GI | 182413695 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.159783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCCG ACCTCCGCTA CGCCATGCGT CAGATGGCCA AGTTCCCCGG CTACACGACC
GTCGTCGTGC TCACGCTGGC GTTCGGCATC GCGGTGAACA CCCAGATTTT CATGATGGTG
AACGCGATCT TCCTCCAGCC GATGGACGTT CGCGACCCCG ACCGGCTGGT CGCGATCGTC
GGCCGGAGCA ATGCGATCAA TCTGCCGCAC CAGATCTCGT TCCTCGATTT TCAGGACCTC
CGCGACGGCT CCAAATCGCT GACCGACCAC GTCGCCTTTC TGCCGATGGC CGCGCACGTC
AGCGCACCCG GCCAATCGCC CGAACGCACC TGGATCGAAG CGGTCACCCC GGATGCGTTC
TCCCGCATGG GCGTCAACGT CGTCCTGGGC CGGCCGCTAC AACCCGCCGA CGGCGCGATG
CCGCCCGGCA CGCCCGTCGC CGTCCTCACG CACCGTTACT GGCAAACTCA GTTCGGTGGC
GATCCCCGCG TCATCGGCCG TTCCGTGCTG ATCAACGCCA AACCGTTCAC GATCGTCGGC
GTCGCGAAGC CCGGCTTCGA AAGCTTCTCC TACTCCGTCA GCGTCAGCCT GTGGGTGCCG
TCCGGCACCT ATGCGCAGTT GCGCCCCGAC GGCGACGGCT TTTTCAAATA CCGCGGCTCG
AGCGCGTGGC GCGTGCTCGC GCATCTCGCC CCGGGCGCCA CGCTCGCGGA AGCCAACGCC
GAACTCGGGG TGTTCGCGCA GCGCTTCGCC CAACAGTTCC CCGACGATCA CCGCGGTTTC
CGTTTTCAGG CGATCCTCGA GCGGCACGCG CGGCCCGATC CGGTCATGGC CGACCTCGCG
CCGGTCATCG GCTGCCTCTT CACCGGGCTG GTCCTGCTGG TGCTCTTCAT CGCCTGCGCC
AACGTTGCGA ACCTGATGGG CAGCCACGCG CTCGCGCGCG AGAAGGAGCT CGTCGTTCGC
GCCGCCCTCG GCGCCTCCCG CTGGCGCATC GTCCGGCTGT TGCTCGCGGA AAGCGTGCTG
CTTGCCGTCC TCGCCGGCAT CGTCGGCTAC AGCCTCGCGT GGTGGGGCGG CGACGCGATG
CGCAGCTTGA CGCCCGCCGG TGATATTCCC ATCCGGGTGA ACGACTCGAT CAGCTGGCAG
GTGTGGGCTT TTACCGCGCT TGTCTCGTTC TGCGCCGGCG TCGGCGCCGG ACTGGTGCCC
GCGCTGCGCT CGTCGCGCAT CGATTTGAAC GAAGGATTGA AACAAGGCGC CGGCCGGCAG
ACCGGTCCGG GCCGCCACCG GCTGCGGAAT CTGCTCGTGA TCGGCCAGGT CGCGACCTCC
GCCGTCGTGC TGATTGCCTC CGTGCTCTTC CTGCGCGGCC TCGCCATCGC GCGTCACGCC
GACGTCGGTT TCCTCCCCGA CCGGCTGCTG ATGCAGTCGT TCGATCTCAA TCTCCAGGGC
TATTCGAAGG AACGCGGACT GCAGTTCCAG CGCGACCTGC TCGAGCGTGT CCGCGCGCTG
CCCGGCGTCG AAGCCGCGAG CCTGGCCCAG CACGTCCCAT TCACGCAGAG CATCCTGATG
CGCGACAACT GGCCCGACAA TCCGTCCGGT CATGTGCCGG ACGATCACAT CGCAGTCGCG
TTCTCCGGCG TCGAGCCGTC GTTCCTCAAG ACCTTTGGCA TCCGGCTGCT CCGCGGTCGC
GACCTGCTGC CGACGGACGA CGAGCGCGCG CCGGAAGTGG CGGTCATCAA CGAGGCCATG
GCGAACGCCT TCTGGCCGGG CAAGGATCCG ATCGGCCAGC ACTTCCGGCT CTGGCGCGGC
GGGCCCGCGA TCGAGGTTGT CGGCGTCGCC GCCACGGGAA AATATCTCAT GATCGGCGAG
CAGCCGCGGC CCTACTATTA CCGTCCGTTC GCCCAGTTCT ACAACATGCC CGCCACGCTG
GTCGTGCGCA CGCAGCAGGC GCCGCACGCG CTCGCCGCGC CGGTCCGCCA GGTGATTCAA
GGACTCGATC CGCATCTGCC GATCTACGGC ACGATCGCGA TGGATGAACA CATGCTGAAC
AGCCCGCTCG CGCTCATGCC GTTCCGCTTC GGGTCGGTGC TCGCCGGCGT CCAGGGCGGC
ATCGCGCTGC TGCTCGCGAT CCTGGGACTC TACGCGGTCG TCGCCTACGG CGTGACCAGC
CGCACCCGCG AAATCGGCGT GCGCGTCGCA CTCGGCGCCA CCAGCCGCAA CATCGTCCGG
CTCGTCTCGC GCGAAGGCCT GCGGCTCACC GCCATCGGTC TCGCGCTCGG CCTGGTGATG
GCCCTCGGTG TGTCCTTCGT CATGTCGCAC GTGTTGATCG GCATCAGCAC GCTCGATCCT
TTCGCCTTCC CGGTGGTCAC CATTGTTCTC GTCGCCACCG CCGCGTTCGC CTGCTTCTGG
CCGGCCCGCA AAGCCACCCA CGTCGATCCG ATGACCGCGC TCCGCGCGGA ATAG
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| Protein sequence | MLSDLRYAMR QMAKFPGYTT VVVLTLAFGI AVNTQIFMMV NAIFLQPMDV RDPDRLVAIV
GRSNAINLPH QISFLDFQDL RDGSKSLTDH VAFLPMAAHV SAPGQSPERT WIEAVTPDAF
SRMGVNVVLG RPLQPADGAM PPGTPVAVLT HRYWQTQFGG DPRVIGRSVL INAKPFTIVG
VAKPGFESFS YSVSVSLWVP SGTYAQLRPD GDGFFKYRGS SAWRVLAHLA PGATLAEANA
ELGVFAQRFA QQFPDDHRGF RFQAILERHA RPDPVMADLA PVIGCLFTGL VLLVLFIACA
NVANLMGSHA LAREKELVVR AALGASRWRI VRLLLAESVL LAVLAGIVGY SLAWWGGDAM
RSLTPAGDIP IRVNDSISWQ VWAFTALVSF CAGVGAGLVP ALRSSRIDLN EGLKQGAGRQ
TGPGRHRLRN LLVIGQVATS AVVLIASVLF LRGLAIARHA DVGFLPDRLL MQSFDLNLQG
YSKERGLQFQ RDLLERVRAL PGVEAASLAQ HVPFTQSILM RDNWPDNPSG HVPDDHIAVA
FSGVEPSFLK TFGIRLLRGR DLLPTDDERA PEVAVINEAM ANAFWPGKDP IGQHFRLWRG
GPAIEVVGVA ATGKYLMIGE QPRPYYYRPF AQFYNMPATL VVRTQQAPHA LAAPVRQVIQ
GLDPHLPIYG TIAMDEHMLN SPLALMPFRF GSVLAGVQGG IALLLAILGL YAVVAYGVTS
RTREIGVRVA LGATSRNIVR LVSREGLRLT AIGLALGLVM ALGVSFVMSH VLIGISTLDP
FAFPVVTIVL VATAAFACFW PARKATHVDP MTALRAE
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