| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1877 |
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| Symbol | |
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| ID | 6207728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2334832 |
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| End bp | 2337258 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641691525 |
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| Product | permease |
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| Protein accession | YP_001818760 |
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| Protein GI | 182413694 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATC TGCGCTTTGC CTCCCGGCAG CTGCTGAAAT CGCCCGGTTT CACGGCCACC
GCCGTGCTCT CGCTCGCCCT CGGCATCGGC GCCGCCACCA CGCTCTTCAG CGTGCTGCAG
GCACTCGTGC TCGATCCCTT CCCGTATCCA CGCTCCGGGG AGATCGTTTA CGTCCGCTCC
AACGGCGGCC AGCCGCTCTC GTTTCCCGAT TTCCGGGACC TGCGTGAGCG CAACCGCAGC
TTTGTCGATT TCGGCGTCTA CCGGCCGGCG CGGATCAATC TGGGCGCGCA AGAGGCCGAG
TCGCTTGCCG CCATTCAATG CACCGCCGGC GTCCTGCGGG CGCTGGGCTC CCGCCCCGCA
CTCGGCCGTT GGTTGGACGA AGCGGACGAC CAGCCCGGCG CCGCGCCGGT CGCCGTCATC
AGCCACGGGC TGTGGCTGCG GGCGTTCGGT GGTGACGCTT CGATCGTCGG CCGGACCGCC
CGGCTGGACG GAAGACCGAC CGAAATCGTC GGGGTCATGC CCGCGGACTT TGAGTTCTCT
TCCCCTTCGT ATGCGGGCCA GGACTATCAG GCGTGGCTCC CGCTGCACGG TGAGCCAAAC
GACCTGGAGC AGCGTGGAAA TCACTGGCTG CTCGGCGTCG CACGGCTGAA ACCGGACGTC
CCGCTCGCGA CCGCCGATGC CGACGTCAAG GCGATCGGCG CGCAACTCGC CGCCCAGTTT
CCCGACACGA ACACGCACAA GCCAATGCTC GTGCGTTCGC TCCGCCAGGA AATCACGCGC
GACACGGCGT CGGGGATGAA ACCGCTCGGC GGAGCCGTGG CGCTGCTGCT GCTGGTCGGC
TGCGCCAACG TCGCCGGGCT CCTGCTCGCC CGCGGCACCC GGCGGCAGGG CGAGTTTGCG
ATCCGGCTGG CCATCGGTGC ATCGCGTCCC GCCCTGGTGC GCCAACTGCT GACCGAAGCG
CTCCTGCTCG GGCTTCTCGG CTGCGCGGTC GGCGTGCTGC TCGCCGCGTG GGGCACCGAT
GCCGTGCGCC AGCTGATCCC GTCCTCACTC GTGATCGAGG CGCGCCGCGC CGCCATCGCG
CTCGATGGCC GCGTGCTGGC CTTCGCCACC GCCACCGGCT TCGTCGCCGC GCTGATCGCC
GGCGCGGTGC CGGCGCTGAC CGCCGCGCAC GGCTCGGTCG CCGTCACGCT GAACGATGCG
GGACGCACCC AGACAGGCTC GCGCCTGCGC CGGCGGTTCC TGCGCAACCT CGTGATGGCC
CAGGCCGCCG TGGCCGTCGT GCTGGCCTAT GCCGCAATCC TGTTCACCGC GAGTTATCTG
AAGGTGTTCG AGACCAATCG CGCGCTGGAC ACCGATCGCG TGCTCACCGC GGAAGTCGCC
CCGCAGGGCG AGCGCTACCG CGCCGTCGCC GCGCGCGTCC GCTTCTGGAA CACCCTCATT
GAGCGGGTGC GGGTGCTGCC CGGCGTGGAG CAGGCCGCGC TGACCTCCAA GCTGCCGCTG
GAAGGCGGCA GCAACTTCGA CGTGCTGATC GACGAGCAGA AGTTCGACCC CAAGGTCCGG
CGTCCGCTCG TGGAAAACAC CGGTGTCTCG CCCGGCTATT TCCGAGCGAT GGGCCTCGGC
TGGCTGCGCG GGCAGCCGGC GGATTTCACG CGATGGGACG GACCGGACAT CCCGGTCGTG
ATCAACCAGA CGATGGCCCG TCAGTGCTGG CCCGATACCG ATCCCTTGGG CCACCGCATT
CGGATCAACA GCGCCCGCTC ACCGTTTCAG TTCCACGTTG TCGGCGTGGT CGAAGACGTG
CGTCAGTGGG GTGCTGAAAC CAGTCCGCGG CCCGAGCTCT ACTATGCGTG CTCGTTGGCG
GGCACGCCGG AGGAGGCGTT GCCGGAGGAA AGTGCCTACC TCGTGGTGCG CACGTCAGGC
GAAGCCCGCG CCGTCGCGGC GCTGATCCGG CATGAGCTCG CGCTCACGGA TGGGGATCTG
GCGCTGTCGA ACGTTCGCAC CATGGGCGAG GTGCTGCATC AGGCCGGCAG CCGGCGCCGG
CTGTCGGCGG GCCTGATCAA CGCGTTCACG GCCATGGCCC TCCTGCTCGC CGCGGTCGGC
ATCTACGGCA CGTTGTCGTG TGTGATCGCG GAACGCACGC GCGAGATCGG CGTGCGGATC
GTCATCGGTG CGCAACCGCG CCAGATCCTC GGGCTGGTCG GCCGGCAGGC CAGCGCGTGG
CTGCTCGGCG GCCTGGTGCC CGGAATCGCG CTCTCGGCCG CGTGCTCGCT GGCGCTTCGA
TCGCTCGTCT ACGGCGCCGA CCCGCTCGAT CCGCTCGTGC TGCTCTCCGG CGCCGGTCTC
GTCGGCGGCG TGCTGCTGGC CGCCTGCATT GGCCCTGCCC GCCGCGCCCT GCGCGTGAAC
CCGGTCGAGG CGCTTCGCGC AGAATGA
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| Protein sequence | MNHLRFASRQ LLKSPGFTAT AVLSLALGIG AATTLFSVLQ ALVLDPFPYP RSGEIVYVRS
NGGQPLSFPD FRDLRERNRS FVDFGVYRPA RINLGAQEAE SLAAIQCTAG VLRALGSRPA
LGRWLDEADD QPGAAPVAVI SHGLWLRAFG GDASIVGRTA RLDGRPTEIV GVMPADFEFS
SPSYAGQDYQ AWLPLHGEPN DLEQRGNHWL LGVARLKPDV PLATADADVK AIGAQLAAQF
PDTNTHKPML VRSLRQEITR DTASGMKPLG GAVALLLLVG CANVAGLLLA RGTRRQGEFA
IRLAIGASRP ALVRQLLTEA LLLGLLGCAV GVLLAAWGTD AVRQLIPSSL VIEARRAAIA
LDGRVLAFAT ATGFVAALIA GAVPALTAAH GSVAVTLNDA GRTQTGSRLR RRFLRNLVMA
QAAVAVVLAY AAILFTASYL KVFETNRALD TDRVLTAEVA PQGERYRAVA ARVRFWNTLI
ERVRVLPGVE QAALTSKLPL EGGSNFDVLI DEQKFDPKVR RPLVENTGVS PGYFRAMGLG
WLRGQPADFT RWDGPDIPVV INQTMARQCW PDTDPLGHRI RINSARSPFQ FHVVGVVEDV
RQWGAETSPR PELYYACSLA GTPEEALPEE SAYLVVRTSG EARAVAALIR HELALTDGDL
ALSNVRTMGE VLHQAGSRRR LSAGLINAFT AMALLLAAVG IYGTLSCVIA ERTREIGVRI
VIGAQPRQIL GLVGRQASAW LLGGLVPGIA LSAACSLALR SLVYGADPLD PLVLLSGAGL
VGGVLLAACI GPARRALRVN PVEALRAE
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