| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1874 |
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| Symbol | |
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| ID | 6207270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2327331 |
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| End bp | 2329733 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691522 |
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| Product | permease |
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| Protein accession | YP_001818757 |
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| Protein GI | 182413691 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.219896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGCTG ACCTCCGCTA CGCCTTCCGC CAGCTGCTGA AATCGCCGGG CTACACCGCG
GTCTCCCTCG TCATCCTCGC GCTTGGCATC GGGATCAACA CCACGCTCTT TTCCGTGGTC
GATCACGTGC TACTCCAGCC GCTGATCTTC CCCAAGGCCG ACCGACTGGT CAGCCTCGTC
GAACGCTCCG GCGAAACCGT CCATCCGGCG GTGAACTACG AGAACTTCGT CGCCTGGCGC
GAGGCCCAGC ATTCCTTCAC CGCGCTCGGC GCCGCCAACG TCTGGAGCGA AGCCGTGCGT
GGCCCAGGTG ACGCCGAACA CCTGACCGGC GCACAAATCA CCTTCGACTA TCTTCAAGCC
CTCGGCGTTG CTCCCCTCCG CGGCCGGCTG TTCACCGCCG AGGATGATCA GCCGAAAGCC
GAACGCACCG TCGTGCTGAG CGAGCCGCTC TGGCGCCGGA TGTTCGGCGG CGAGGATTCC
GCCATCGGCG GCAAGCTAAG CATCCGCGAC CAGTCCTACA CAATCATCGG CGTCCTGCCG
CGCGGCGTCA TCCAGCCCGT CGTCGAATGC GAGTTCTGGG TGCCCGTGGC GCCTTTCGTC
TGGGACCTCG TCGGCCAGCC CAATCGCCCG CCGGGACCCT TCGTCGTCCT CGGCCGGCTG
AAGCCGGGGG TAACGCTTGA GACGGCCCGC CACGACATGA CTACCATTGC GCAGCAACTC
GCCGCCACCC ATCCGGCGCT GAAGGACCGC GGGATCGTGC TCACGTCGTT GCACGATTCT
CTGCTCGGCA GCGCTCGGGC GATGTTGTGG CTCCTCCTCG GCGCGGCGAG CGGCGTGCTG
CTGATCGCGT GTGCCAACCT TGCCAGCTTG CAGCTGGCCC GCGCGCTCGG CCGGCAAAGG
GAATTCGCGA TCCGTAGTTC CCTCGGCGCC GGCCGCGGCC GGCTCATCGC ACTGCTCCTT
GCCGAATCCT CGCTGCTGGG GCTCGTCGGC GCCGCCGCGG GCGCAGTCGT CGCCGCCTGG
TCCATCGATG CCGTGCGCAC CTGGCTGCCC GCCGGGCTCC CGCGCCTCGA TTCGCTGGCG
CTCGACCGAC GCGCGCTCGG CTTCGCCCTC GCCGCGGGTG TGCTCGCGGT GTTGCTCTCC
AGCCTCGCCG CGGTGTGGCA CCAACTCCGC GGTCGTCCCC GCTCCGCCGC TAGCCTCGCC
TGGGCGGCGC AACAGCGCCC GTCCGGCCAC CGCTGGCTCT TCGGTCTGGT CACCGCGCAG
ATCGCCATCA CCTGCCTGCT CCTGGTCGGC ACCGGGCTGA TGGTCCGGTC GCTCTACCGC
CTCTACCACG CCAACCTGGG CTTCACTCCG GTGCGCGTGG TCTCGTTCGT CTGGGCCCCG
CCCCTCGAGG ATGCGCCGCG GGCCGCGATG CTTGAACGCG CCGTCGCCCG ACTTTCCGTG
CTGCCCGGCG TCACCCAGGT CGGCGTCATC TCCGAAATGC CGCTCGGCGG CGACTACTTC
GTTCGGCCCC TCAGTGTCGA AGGCCTGCCG CCTCCTCCAC CGAACCAGCA ACCGCAGGGC
GCGAGCTTCA GCGTCACCCC GGGCTACTTC TCCGCCGTAG GCATGCCCAT TCTGCGCGGC
CGCGGATTTT CCGACCGCGA TAACACGATG GCGGCCCCGA AGGTCGCGGT GATCGACACT
CGTCTCGCCG CCCTGCATTT TCCGGGACAG GATCCCATTG GCCGCCGGAT CAAGTTCGGC
ACGTCGGGCG ACGGCCGACC GTGGGTCGAA GTGGTCGGCC TCGTCGAGCA TGTGGAAAAC
CGCGGGCTCG GAAGCTCGAC CGACGTGCAG GCTTACATTC CTTACGGGCA GCGCGGCGCC
CCCTGGCGAA TGTCGTTCGT CGTGCGCGGT TCCGGCGACA CCGCTCCGCT CCTGAGCGAG
ATTCGCCAGA CGATGCGCAC GCTCGCGCCG GACATTCCCA TTTACTCGCT CGCGACGATG
GACGCCCGGT TCGACGCGAC CATCGCCCCG CAGCGGCTGA CGGGCGGCCT GCTCGGCGTG
TTCGCCAGTC TCAGCATCAT CCTGGCGACG GTCGGCCTCT ACGGCGTGCT GTCGTATCAA
GTCGGCCAAC GCACCCGCGA GCTCGGCATC CGCCTGGCGC TCGGTGCCCA GCCGAAGCAG
GTTCTCACGA TGGTCCTGCG CCAAGGCGTT GCCGTGGCGG CCGTCGGTGG ACTGATCGGG
CTGGTCGCCG CCGGCGTGAG TTCGCGCCTG CTCAAGCATC TGCTCTACCA CGTCGCGCCG
ACAGACCTGC ACACCTTCGG TGCCGTGCTC ACGCTGGTCC TGGCCACCGC GTTGCTGGCC
TGCTGGCTCC CCGCCCGCCG CGCCACCCGC GTCAACCCCG TCGACGCGCT CCGCGCCGAG
TAG
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| Protein sequence | MYADLRYAFR QLLKSPGYTA VSLVILALGI GINTTLFSVV DHVLLQPLIF PKADRLVSLV
ERSGETVHPA VNYENFVAWR EAQHSFTALG AANVWSEAVR GPGDAEHLTG AQITFDYLQA
LGVAPLRGRL FTAEDDQPKA ERTVVLSEPL WRRMFGGEDS AIGGKLSIRD QSYTIIGVLP
RGVIQPVVEC EFWVPVAPFV WDLVGQPNRP PGPFVVLGRL KPGVTLETAR HDMTTIAQQL
AATHPALKDR GIVLTSLHDS LLGSARAMLW LLLGAASGVL LIACANLASL QLARALGRQR
EFAIRSSLGA GRGRLIALLL AESSLLGLVG AAAGAVVAAW SIDAVRTWLP AGLPRLDSLA
LDRRALGFAL AAGVLAVLLS SLAAVWHQLR GRPRSAASLA WAAQQRPSGH RWLFGLVTAQ
IAITCLLLVG TGLMVRSLYR LYHANLGFTP VRVVSFVWAP PLEDAPRAAM LERAVARLSV
LPGVTQVGVI SEMPLGGDYF VRPLSVEGLP PPPPNQQPQG ASFSVTPGYF SAVGMPILRG
RGFSDRDNTM AAPKVAVIDT RLAALHFPGQ DPIGRRIKFG TSGDGRPWVE VVGLVEHVEN
RGLGSSTDVQ AYIPYGQRGA PWRMSFVVRG SGDTAPLLSE IRQTMRTLAP DIPIYSLATM
DARFDATIAP QRLTGGLLGV FASLSIILAT VGLYGVLSYQ VGQRTRELGI RLALGAQPKQ
VLTMVLRQGV AVAAVGGLIG LVAAGVSSRL LKHLLYHVAP TDLHTFGAVL TLVLATALLA
CWLPARRATR VNPVDALRAE
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