| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1873 |
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| Symbol | |
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| ID | 6205065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2324860 |
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| End bp | 2327271 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691521 |
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| Product | permease |
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| Protein accession | YP_001818756 |
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| Protein GI | 182413690 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCCG ACCTCCGCTA CGCCTTCCGC CAGCTGCTGA AATCGCCCGG CTTCACCGCC
GTCGCGGTGA TCACGCTCGC CGTCGGCATC GCCGGCACCG CCGCCGTCTT CACGGTCGTC
AAAAGCCTGC TCCTTGATCC GCTTCCCTAT CCCGAGGGCG ACCGGATCGG ACAGATCTGG
ACGAAGTCCA GCGGCTCGCA CTTCGACTTC AAGCCGCTGT CCACCCCCGA TCTCCTCGAT
ATCCAGGAGC AAGTCGGAGG ACTCGAAGCC GTGGGCGCAT TTTCGCCGCG ACGCTACACG
CTCGGTGGCG ACCAGCCCGA GTCGGTTGAG GGCGCCTATT GCACGCCCGG TGTTTTCTCT
ACGCTGAAAG TCCCGCCGCT TCTCGGCCGC TGGTTCAGCG CCGACGACGT GGCCGGCCAG
GACGGCGCCG CGGTCGCGAT CATCAGTCAT TCACTCTGGC AGAGCCGGTT TGCCGGACGA
CCCGATTGCA TCGGTCGCAC ACTGCGGCTC GATGGCCGCA ACGTCACGAT TGTCGGCGTG
ATGCCGCCCG GCTTCGAGTT GCTGTCGTTG TGGACGCGCG AGCGCCGGTT GCAGATCTTC
CTCCCGCTGG TGCTTCGCCA CCAAGGTGCC AGCCGCGGCG ATTATTGGCT CGCTTCGCTG
GCCCGGCTAA AGCCAGGCGT CAGCGCCAGC CAGGCCGACG CAGAACTCGG CGCCGTCGCC
GCGAAAATCC GCCAGTCCAC GCCCGACGCC GATCCGCGCA AGGAATTTTG GTTCATGCCG
CTGCAGCAGG GACTCGGCGG CCTGCCCGCG CTGCGCATCT CGGTCCTGCT CGCCGCCGGC
TGGACCCTGC TGGTCCTCGC GGCGCAAAAC GTCGCGAGCA TGATGCTCGC GCGCGGTATC
AGCCGCCAAT CCGAGATCGC CGTGCGCGTG GCGCTCGGTG CCTCGCGCCT GCGCATCATC
CGCCTGGTGC TCGCCGAGAG CATCCTGCTC GCGCTGCTCG CCAGCGGCGC CGGCTTTCTG
CTGACGCTCT GGGGCCTCGA CGCGCTCCGC GCTGCGTTGC CCGCCGCCGT CATGCCGCGC
GCCGGACTCG TCGTCGATGG CTGGTTGCTC GGTTGCATCG GATTGCTCGC CGTCTTCGTC
GTGCAGGCCG CCGGACTGAC GCCCGCACTC CTCGCCTCCA AGACCGATGT GGTGAGCGGC
CTCAAGGAAG CTGGCGTCAA TCACACCAGC GCCCGCAAAA CCCAGCGACG GCTGCGCCGG
CTGGTCATCG GCCAGATCGC GCTCGCCCAG TTCCTCGTCA GCATCGCGAT GCAGCTGTCT
GGAACCTATC AACAAATGGT CGCCGGATCC CGCGCGATGA TTTCCGATCA AGTCGTCACC
TCCGCCGTGG TCGTGCGCGG CACGCAGTAT TCGGACGCAA CCCGCGTCGC CTTCTGGGAT
CGGTTCCTCG CCGCGGTGCA GGCACAGCCC GGCGTGAGCG ATGCCGCGGT GACGACCAAG
CTCCCGCTCA ACGGCGGCAT CAGCATGCCG CTGCTCACCG ACCAGGAGAG CTACGATCCC
GCCTCGCCCC GCCCGTATGT GGAGGTCTCC TACATCTCTC CGCAGTTCTT CGCCGCCCTC
AACGCCCGGC TGCTGCAAGG CCGGCCGCTC ACCGAGCAGG ACTCCGCCGT CCCGCGCAGC
GCCGTGGTCA TCAACCGCAC CATGGCCCAG CGTTACTGGC CCGGGCAAAA TCCCATCGGG
CACCACCTTC GCCCGGCGCA GTCGGGTGAA ACCTGGTCGG GGCAGATCGT CGGCGTCGTC
GAGGACATCC GCCAATTCGC CGAGCGTCCC GCCAAACCCG AAGCCTACTT CGCGTATTCC
GACAGCCCGT GGCCCGAGGG CTTTCTCGTC GTGCGGAGCC GCGCCGGCCT CCCCGTGCCG
GTCGACTCGA TCCGCGCCGA GCTGGCCCGG CTCGATCCGG ATCTGGCGCT CGCCGACGTC
AAGTCCATGC GGAATCACTT CGACGATTCC GGCCGCGTCC TGGCTATTGT CACCTCGGTA
GTGGACGCGC TCACCGTCGG CATTCTTGCA CTCGCCGCGC TCGGACTCTA CGGCACGCTC
TCGTTCACCT TCGCCCGCCG CCGCCGTGAC ATCGGCGTGC GCGTGGCCTT CGGCGCCGCC
CCGCGCGACA TCGCCACGCT GGTCGTGCGT CAGGCGCTCG CGTGGGTTGC GCTCGGCGGC
GTGATTGGGG CCCTCGGCTC CTGGCTGATC GCGAAAGCCG TCGGCGCCAT GCTCGCCGAC
GCCACCCCAC TGAGCCTCCC GCAGCTCGCC GCGAGCGTTG CCACCGTGCT CGCCGCCGCG
GCGCTCGCCT CCTGGCTCCC CGCGCATCGC GCCACCCGCC TTAACCCCAT CGACGCGCTC
CGCGCGGAAT AG
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| Protein sequence | MLSDLRYAFR QLLKSPGFTA VAVITLAVGI AGTAAVFTVV KSLLLDPLPY PEGDRIGQIW
TKSSGSHFDF KPLSTPDLLD IQEQVGGLEA VGAFSPRRYT LGGDQPESVE GAYCTPGVFS
TLKVPPLLGR WFSADDVAGQ DGAAVAIISH SLWQSRFAGR PDCIGRTLRL DGRNVTIVGV
MPPGFELLSL WTRERRLQIF LPLVLRHQGA SRGDYWLASL ARLKPGVSAS QADAELGAVA
AKIRQSTPDA DPRKEFWFMP LQQGLGGLPA LRISVLLAAG WTLLVLAAQN VASMMLARGI
SRQSEIAVRV ALGASRLRII RLVLAESILL ALLASGAGFL LTLWGLDALR AALPAAVMPR
AGLVVDGWLL GCIGLLAVFV VQAAGLTPAL LASKTDVVSG LKEAGVNHTS ARKTQRRLRR
LVIGQIALAQ FLVSIAMQLS GTYQQMVAGS RAMISDQVVT SAVVVRGTQY SDATRVAFWD
RFLAAVQAQP GVSDAAVTTK LPLNGGISMP LLTDQESYDP ASPRPYVEVS YISPQFFAAL
NARLLQGRPL TEQDSAVPRS AVVINRTMAQ RYWPGQNPIG HHLRPAQSGE TWSGQIVGVV
EDIRQFAERP AKPEAYFAYS DSPWPEGFLV VRSRAGLPVP VDSIRAELAR LDPDLALADV
KSMRNHFDDS GRVLAIVTSV VDALTVGILA LAALGLYGTL SFTFARRRRD IGVRVAFGAA
PRDIATLVVR QALAWVALGG VIGALGSWLI AKAVGAMLAD ATPLSLPQLA ASVATVLAAA
ALASWLPAHR ATRLNPIDAL RAE
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