| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1849 |
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| Symbol | |
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| ID | 6207213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2298523 |
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| End bp | 2300133 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641691497 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001818732 |
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| Protein GI | 182413666 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.390874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCCC TATTGCCAGC ATCCGCGACC GTTTTGCCCG ATGAACAACT GGTCGCCCGC
ACCCAGGCCG GCGATCGCGA CGCTTTCCGT CGGATCGTCG AGCGTTACCA GAGCCTGATC
TGCTCGCTCG CGTACAATGC GACGGGCAAC CTCGCTGAGA GTGAGGATTT CGCGCAGGAA
ACTTTTCTGG CCGGCTGGAG GCAGATCGCG CAGCTCCGCG AGCCGGCGAA GCTGCGGTCC
TGGCTCTGCG GCATCGCTCG CAACCTGATC AACAACCGCC GCCGCCGGCT CGCGGCGCAG
CCGTGGCCAG CCGCCGCCGG GACCGGTCAT CAGGAGTTGG TGGCGCCCGA CCCGTCGCCG
AGCGACGCGG CCATCCAGCG CGAACAGGAG GCGATTCTAT GGCAGGCGCT GGAGCGTATT
CCCGCAGACT ACCGGCAGCC GCTGATTCTT TTCTATCGCG CGCATCGCTC GATCGAAGTC
GTGGCGCGGG ATCTCGAGTT GAGCGAAGAC GTCGTCCGGC AGCGGCTCTC GCGCGGTCGC
AAGCTGCTGC AGCGCGAGGT CCTGGCTTTC GTCGAGGGCA CGCTCGCGCG GACTGCGCCG
GGCGCGATGT TCACGACCAG CGTAATGGCC TCGCTGCCGC TACTCGCCGC GACCAGCTTG
ACAAGCGCGG GCATGGGCGG CGCCGCCGCC CAATGGACCG GCGCCGGTCT CGGCGGAAAA
CTGCTGCTCG CATTCAACGT CGTGGCGGGT CCGCTGCTCG GGATCGCGGC GGCGTGGCTC
GGCGTGCGCG AGTCGTTCCG AGAAGCGGAT TCGTCGGACG AACGGCGACT GGTGAAACGC
TACTACCTGA CGATCGCCAC CGGCACGGTG CTCTTCACAC TCGCCAGCAT TCCGCTGAAC
AATTGGGCGA AAGCGGGCGG AGGATTCAAT CCGACGCCGA TGCTGTTCTG GCTCGCGTTG
CTACTCTCCT ACGTCGGTGG CGTAGCGGTG CTGGCAACTC GGCTGGTGCG GAAGCAGAAC
CGATTGCGTG CCATCGTAAC CGCTCTGGCG CCCCAACCCG CGCAGCCGGC CGCAACCGTC
GCCCACGAAT ATCGCAGCCG GTGGACCCTG CTCGGACTTC CACTCGTGCA CGTGCGGCTC
ACCCGGCGCG CGGACGGATT GGAGCGCCCG GCGGTGGGCT GGATTGCGAT CGGCAACTGC
GCGTTCGGTC TCCTGTTCGC GTGGGGCGGA ATCGCAGCGG GACTCGTGAG CGGCGGCGGG
ATTTCGGTCG GAATCGTCTC GATCGCTGCG GTGAGCCTGG GCGGTTTCGC AATCGGCGGG
CTGGCGATCG GGTTCTGTGC AATCGGCGGT GTGGCCGTTG GTGCCATCGC GGCGGGCGCG
TTTGCCTTTG GGTGGATCGG CGCCGAGGGA CGCTACGCGA TTGCACGGGA GTTTGCGCTG
GGGTTGCATG CTGCCGCAGC GCATGCCAAC GACGCCGAGG CGCGCCAGTT CTTCGCCGGC
CGGCCGTGGG TTGATCTCCA CACCTGGGTC GGCCAGGCGC TGCTCAGCCT CGTGTGGCTG
CCCGCGGTCT TCGTGATCTG GCAATCGCTG CCCCGCTTCC GCCGGAGCTG A
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| Protein sequence | MPPLLPASAT VLPDEQLVAR TQAGDRDAFR RIVERYQSLI CSLAYNATGN LAESEDFAQE
TFLAGWRQIA QLREPAKLRS WLCGIARNLI NNRRRRLAAQ PWPAAAGTGH QELVAPDPSP
SDAAIQREQE AILWQALERI PADYRQPLIL FYRAHRSIEV VARDLELSED VVRQRLSRGR
KLLQREVLAF VEGTLARTAP GAMFTTSVMA SLPLLAATSL TSAGMGGAAA QWTGAGLGGK
LLLAFNVVAG PLLGIAAAWL GVRESFREAD SSDERRLVKR YYLTIATGTV LFTLASIPLN
NWAKAGGGFN PTPMLFWLAL LLSYVGGVAV LATRLVRKQN RLRAIVTALA PQPAQPAATV
AHEYRSRWTL LGLPLVHVRL TRRADGLERP AVGWIAIGNC AFGLLFAWGG IAAGLVSGGG
ISVGIVSIAA VSLGGFAIGG LAIGFCAIGG VAVGAIAAGA FAFGWIGAEG RYAIAREFAL
GLHAAAAHAN DAEARQFFAG RPWVDLHTWV GQALLSLVWL PAVFVIWQSL PRFRRS
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