| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1847 |
|---|
| Symbol | |
|---|
| ID | 6206451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 2295416 |
|---|
| End bp | 2297773 |
|---|
| Gene Length | 2358 bp |
|---|
| Protein Length | 785 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641691495 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001818730 |
|---|
| Protein GI | 182413664 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAACTC TCAACCTCAA GGCCGGCCGC GCCTGTTTCC GCCTTCTCTC CGGGGTCCGC
CACCGCCTGC TGGCCGCGTG CTTGGCCGGA CTCGCGCTCG CCGCACCGCC GGCCCGCGCC
GAAGCGGAGG CGCCGGCGCC GCCCGACGTC CTCATTCTCA ATTCCTACGC GCCCGGCTAT
GCCTGGAGCG ACGACGAGAT CGCCGGCGCG CTCGGCGTGT TGCGCAAATC GCATCCGCTC
ATCGAGCCCG TCATCGAATA CCTCGACTTC AAGCGGTTCA CCGATCCGGC CCGCGAGCGC
TGGCTGATCG AGGACGTCGC CGACAAGTGT CGCGTCCGGC CGCCCCGGCT CATCATCACC
TTCGACAACG CCGCCTTCGA TTTTGCGCTC AAATACCGCG CGCGGCTCGG CCCCGACATC
CCGATCGTCT TTGGCGGCAT GAATCGGTTC ACGCCCCCCA TGATCGCCGG CCACCGCGGC
ATCACCGGTG TCTCGGAGCA GTCGGACTAC AGCGGCACTT TCGCGCTGAT CGCGCATCTC
CGCCCCCGGG CCCGGCGCGT GCTGGTCATC AGCAACCAGA CGGAGAGCGG CCGCGAATCG
CGCGCGGCGT TCGCGGAGCT CCGGCCGCGC TACGCCGACC GCTACACCTT CGAATTCTTC
GACCACTGGA CCAATGCGGA GCTGATCGAC CGCGTGGCGA ACCTGTCCGA CGACTGGGTT
GGCCTGATTC TGGACGCCAC GCGCGACGAG ACGGGCCACG ACAACTATTT CGCGCCGGGC
TTCAGTCAGG CCCTTTCCAC ACAGGCTCGC GTGCCGGTCT TTCTCACTTC CCGGCCGCCG
GGCGGCAACG ACTGGTCGGT GTACCCGTGG GACGGTATTG GCGGTGGCAT GGTCGTCGCG
GACCTGCATG GCGCCGCCGT CGGCGAACTC GCCGCGCGCG TGCTGGCCGG CGAGTCTCCG
GCGGGCCTTC CGGTGGTGCG TTACTCGCCC CAGCGACTCG AAGTGGATTA CCGGCAGATG
CAGCGGTTCC GGCTCTCCGT GGACCAGTTG CCGCCGGGCA CCCAGGTGCT CAACGCGCCG
GTTACCTTCT ACCAGGTTAA CCGCTCGCGG ATCATCCTGA CGGCCGGGGT GATTCTGCTG
CTGTGCGGCA TCATCGCGGC GCTCTCGCTC AACATCCTCT GGCGCCGGCG CGCGGAGCGG
GCGCTGCGTC GCGCCGAAGA GCAGCTGCGA TCCGCCCAAA AGCTCGAGGC TATCGGGCTG
TTGGCCGGCG GCGTGGCGCA CGATTTCAAC AACATCCTGC AGGTCATTCG CGGGCATGCC
GGATTTCTCG AGGAATCGCT CGCCGGAGCC GCCGCGCCGC TGGAGGACGT GCGCACGATC
CTGAGCGCGT CGGAGCGCGG GGCTCAGTTG ACCCGGCAGC TGCTCGCGTT CAGCCGCAAG
CAGCCGCTCC TGCCGGAGGC GGTGGAGGCC AACGCGCTCG TGACCGACCT CGTCAAGATG
CTGCGCCGCG TACTCGGCGA GCACATCGAG GTGCAACTCG CGCTGCTGCC TGAACCGTGC
ACGTTCGTCG CCGACAAAGC GCAGCTGGAG CAGGTGTTGC TCAATCTCTG CGTCAACGCC
CGCGACGCGA TGCCCTCCGG CGGCCGGCTG CGGATCGAGC TGAAACAAAC CACGCTGGCG
GCGGCCGACA CGGCTTCGCT GCCCGAGTTG AAGCCCGGGC CGCACCTCGT GCTCACGGTG
AGCGACACCG GTTGCGGCAT GCGGCGCGAG CTGGTGGAAC ACCTGTTCGA GCCATTCTTC
ACCACCAAGG CCCCCGGTCA CGGCACGGGG CTCGGGCTCT CGGTCGTCTA CGGGGTCGTC
CGGCAACACG GCGGCGCGAT CCGCGTCTAC AGCGAGGTGG GCCAGGGTTC GGTGTTCCGG
ATTCTCCTCC CGCTCAACCC GGCGGTGGCC AGCGTTCCCA CCGAAAAGAT CGCCGAAGAG
TTTCCCGCCG GCCACGGCGC CATTCTGCTC GCCGAAGACG ACCCGCAGGT GCGGCGCATC
GGCGAGCGCG TTCTCGCCCA CAACGGATTT GAAGTCCTCA CCGCCGCCAA CGGCGAGGAG
GCTGAGCAGC TCATCGCCGA GCACCATGCC CGGCTCCGGC TGGTGGTCCT CGACGTGCTC
ATGCCGAAGC GCACCGGCCG CGAGGTCTTC AACACGCTGC GCCGCGAATA TCCCCGCGTC
CGGGTCCTGT TCTGCAGCGG CTACAGCGCC GACATGCTCC CGAAGGAGAT CGCACCCGAA
GCCGGTGTCG CGCTGATCAA CAAGCCGTAC ACGGCGCGCG AGCTGCTCGA CCGCGTGCAC
CAGCTGCTGC GGGACTGA
|
|---|
| Protein sequence | MKTLNLKAGR ACFRLLSGVR HRLLAACLAG LALAAPPARA EAEAPAPPDV LILNSYAPGY
AWSDDEIAGA LGVLRKSHPL IEPVIEYLDF KRFTDPARER WLIEDVADKC RVRPPRLIIT
FDNAAFDFAL KYRARLGPDI PIVFGGMNRF TPPMIAGHRG ITGVSEQSDY SGTFALIAHL
RPRARRVLVI SNQTESGRES RAAFAELRPR YADRYTFEFF DHWTNAELID RVANLSDDWV
GLILDATRDE TGHDNYFAPG FSQALSTQAR VPVFLTSRPP GGNDWSVYPW DGIGGGMVVA
DLHGAAVGEL AARVLAGESP AGLPVVRYSP QRLEVDYRQM QRFRLSVDQL PPGTQVLNAP
VTFYQVNRSR IILTAGVILL LCGIIAALSL NILWRRRAER ALRRAEEQLR SAQKLEAIGL
LAGGVAHDFN NILQVIRGHA GFLEESLAGA AAPLEDVRTI LSASERGAQL TRQLLAFSRK
QPLLPEAVEA NALVTDLVKM LRRVLGEHIE VQLALLPEPC TFVADKAQLE QVLLNLCVNA
RDAMPSGGRL RIELKQTTLA AADTASLPEL KPGPHLVLTV SDTGCGMRRE LVEHLFEPFF
TTKAPGHGTG LGLSVVYGVV RQHGGAIRVY SEVGQGSVFR ILLPLNPAVA SVPTEKIAEE
FPAGHGAILL AEDDPQVRRI GERVLAHNGF EVLTAANGEE AEQLIAEHHA RLRLVVLDVL
MPKRTGREVF NTLRREYPRV RVLFCSGYSA DMLPKEIAPE AGVALINKPY TARELLDRVH
QLLRD
|
|---|
| |