Gene Oter_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1839 
Symbol 
ID6205059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2284939 
End bp2286885 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content67% 
IMG OID641691487 
Productsignal peptide and transmembrane prediction 
Protein accessionYP_001818722 
Protein GI182413656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.107025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCC GCCACAGCTC GATTTGCGCT CTGGCCAGTG CCGCCATCTA CGCAGTCTTC 
ACTCCTGCCG CCGCGGGTGC CGCGGCCTTG GTGGCCGGCA AACTCGAGCA ATGGCACAAA
ATCACGCTCT CGATCGACGG GCCCGAGGCC CGCGAGACCG ACACCTCGCC AAACCCGTTC
CTCGACTACC GGATGGACGT CACATTCACG CACGAATCGG GCGCACCGAG CTACCGTGTG
CCTGGTTATT TCGCCGTCGA TGGCAACGCC GCTGAAACCT CCGCCTTCGC CGGCCGGATC
TGGCGCGCAC ATCTCGCGCC CGACAAGCCG GGCATGTGGC GCTATGCGGT CTCGTTCCGT
CGCGGGCCCG AGGTCGCGGT CAGCACTCTT GAAGCCGGCG CGCCGGTGGA CGGCTGCGAC
GGCATCAGCG GTGAGTTCAC CGTCGTCCCG ACCGACAAGA CCGGCCGCGA TTTCCGCGCG
CACGGCCGAC TCGACTACGT GGGCGGCCGC TACCTCCGCT TTGCCGGCTC GGGCGAGTAT
TTCCTCAAGG TCGGCGCCGA TTCGCCGGAG AACCTGCTCG GCTACTCCGA CTTCGATGGC
ACGCGCTCGA ACAAGCCCGG CACGCCCGCG CGCCCCGACG AAGCCGCGCC GCCTTCACTG
CTGAAGACCT GGCAGCCCCA CGTGCGCGAT TGGCGCGAGG GCGATCCAAC GTGGCAGCAC
CGCAAGGGCA AGGGCTTGAT CGGCGCGCTC AACTATCTCG CAAGCACCGG CTGCAACGCG
TTCTCCTTCC TCACCTACAA CGCCGGCGGC GATGGCGACG ACGTGTGGCC GTTCGTCGAA
CGCGATGATC CGCTCCATTT CGACTGTTCG AAGCTCGACC AGTGGCAGAT CATCTTCGAT
CACGCCACCG CGCTCGGTCT GCACCTGCAC TTCAAACTCG AGGAAACGGA AAACGACGAC
AACCGCCCCG GCGGCGATGG CCAGATCGGC GACGTGCCCA CCGCACTCGA CCGCGGCAAG
ACCGGCGTGG AGCGCAAGCT CTACCTGCGC GAGCTGATCG CTCGCTTCGC CCACGAGCTC
GCACTCAACT GGAATCTCGG CGAGGAGAAC ACGCTTTCCA CCGAGCAGCA GCAAGCGATG
GCGGCCTTCA TCCGCGACAC GGACCCGTAT CATCACCCGA TCGTGCTCCA CACGTTTCCC
GATTGGCAGG AGCGCGTCTA CCGACCGCTG CTCGGCGACC GCTCGGCGCT GACCGGCGTG
TCGCTACAGA CCGGCTGGGA GCAGTCGCAT CGCCGCGTGC TGCAGTGGAT CGAGGAATCG
GCCGCGGCCG GAAAACAGTG GGTCGTCGCC CACGACGAGC AGAACCCGCA CTACACCGGC
GTGCCGCCGG ACACCGGCTG GGAAGGTTTC GATGGCACGG CGCGCCCGGA AAAGTACAGC
CGCCCTTACA CCGCTGACGA TGTCCGGAAA CACACGCTCT GGGGCTCGCT GCTCGCGGGT
GGCGCCGGCG TGGAATACTA TTTCGGGTAT ACGCTCCCGC AAAACGACCT CGGCGCGCAG
GACTGGCGCA GCCGCGCCCA ATCCTGGAAG TGGTGCGACC TCGCGCTGCG GTTCTTCCGG
GAGAACGCGA TTCCGTTTTG GAACATGCAC AACGCCGACG AGCTCGTCGG CAATCCGTCG
CACGACAACT CGCGCTACTG CTTCGCGCAG CCTGGAGAAA TCTATGTCGT CTATCTGCCG
AACGGCGGCA GCGCCGAGCT CGATCTCGGC CGCGGCGCGG ACGGCGCAAC GTTCCAGGTG
CGCTGGTTCA ACCCGCGCGA GGGCGGCCCG CTGCAGTCCG GCAACGTGAG CGAAGTGAGA
GGCTCCGGTC GCGTGTCGCT CGGCGAACCG CCGGCCGATG CCGCCGCCGA CTGGGTTGTT
CTCGTGGCAC GCGCGCCCCG CCCGTGA
 
Protein sequence
MRIRHSSICA LASAAIYAVF TPAAAGAAAL VAGKLEQWHK ITLSIDGPEA RETDTSPNPF 
LDYRMDVTFT HESGAPSYRV PGYFAVDGNA AETSAFAGRI WRAHLAPDKP GMWRYAVSFR
RGPEVAVSTL EAGAPVDGCD GISGEFTVVP TDKTGRDFRA HGRLDYVGGR YLRFAGSGEY
FLKVGADSPE NLLGYSDFDG TRSNKPGTPA RPDEAAPPSL LKTWQPHVRD WREGDPTWQH
RKGKGLIGAL NYLASTGCNA FSFLTYNAGG DGDDVWPFVE RDDPLHFDCS KLDQWQIIFD
HATALGLHLH FKLEETENDD NRPGGDGQIG DVPTALDRGK TGVERKLYLR ELIARFAHEL
ALNWNLGEEN TLSTEQQQAM AAFIRDTDPY HHPIVLHTFP DWQERVYRPL LGDRSALTGV
SLQTGWEQSH RRVLQWIEES AAAGKQWVVA HDEQNPHYTG VPPDTGWEGF DGTARPEKYS
RPYTADDVRK HTLWGSLLAG GAGVEYYFGY TLPQNDLGAQ DWRSRAQSWK WCDLALRFFR
ENAIPFWNMH NADELVGNPS HDNSRYCFAQ PGEIYVVYLP NGGSAELDLG RGADGATFQV
RWFNPREGGP LQSGNVSEVR GSGRVSLGEP PADAAADWVV LVARAPRP