Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1839 |
Symbol | |
ID | 6205059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2284939 |
End bp | 2286885 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641691487 |
Product | signal peptide and transmembrane prediction |
Protein accession | YP_001818722 |
Protein GI | 182413656 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.107025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATCC GCCACAGCTC GATTTGCGCT CTGGCCAGTG CCGCCATCTA CGCAGTCTTC ACTCCTGCCG CCGCGGGTGC CGCGGCCTTG GTGGCCGGCA AACTCGAGCA ATGGCACAAA ATCACGCTCT CGATCGACGG GCCCGAGGCC CGCGAGACCG ACACCTCGCC AAACCCGTTC CTCGACTACC GGATGGACGT CACATTCACG CACGAATCGG GCGCACCGAG CTACCGTGTG CCTGGTTATT TCGCCGTCGA TGGCAACGCC GCTGAAACCT CCGCCTTCGC CGGCCGGATC TGGCGCGCAC ATCTCGCGCC CGACAAGCCG GGCATGTGGC GCTATGCGGT CTCGTTCCGT CGCGGGCCCG AGGTCGCGGT CAGCACTCTT GAAGCCGGCG CGCCGGTGGA CGGCTGCGAC GGCATCAGCG GTGAGTTCAC CGTCGTCCCG ACCGACAAGA CCGGCCGCGA TTTCCGCGCG CACGGCCGAC TCGACTACGT GGGCGGCCGC TACCTCCGCT TTGCCGGCTC GGGCGAGTAT TTCCTCAAGG TCGGCGCCGA TTCGCCGGAG AACCTGCTCG GCTACTCCGA CTTCGATGGC ACGCGCTCGA ACAAGCCCGG CACGCCCGCG CGCCCCGACG AAGCCGCGCC GCCTTCACTG CTGAAGACCT GGCAGCCCCA CGTGCGCGAT TGGCGCGAGG GCGATCCAAC GTGGCAGCAC CGCAAGGGCA AGGGCTTGAT CGGCGCGCTC AACTATCTCG CAAGCACCGG CTGCAACGCG TTCTCCTTCC TCACCTACAA CGCCGGCGGC GATGGCGACG ACGTGTGGCC GTTCGTCGAA CGCGATGATC CGCTCCATTT CGACTGTTCG AAGCTCGACC AGTGGCAGAT CATCTTCGAT CACGCCACCG CGCTCGGTCT GCACCTGCAC TTCAAACTCG AGGAAACGGA AAACGACGAC AACCGCCCCG GCGGCGATGG CCAGATCGGC GACGTGCCCA CCGCACTCGA CCGCGGCAAG ACCGGCGTGG AGCGCAAGCT CTACCTGCGC GAGCTGATCG CTCGCTTCGC CCACGAGCTC GCACTCAACT GGAATCTCGG CGAGGAGAAC ACGCTTTCCA CCGAGCAGCA GCAAGCGATG GCGGCCTTCA TCCGCGACAC GGACCCGTAT CATCACCCGA TCGTGCTCCA CACGTTTCCC GATTGGCAGG AGCGCGTCTA CCGACCGCTG CTCGGCGACC GCTCGGCGCT GACCGGCGTG TCGCTACAGA CCGGCTGGGA GCAGTCGCAT CGCCGCGTGC TGCAGTGGAT CGAGGAATCG GCCGCGGCCG GAAAACAGTG GGTCGTCGCC CACGACGAGC AGAACCCGCA CTACACCGGC GTGCCGCCGG ACACCGGCTG GGAAGGTTTC GATGGCACGG CGCGCCCGGA AAAGTACAGC CGCCCTTACA CCGCTGACGA TGTCCGGAAA CACACGCTCT GGGGCTCGCT GCTCGCGGGT GGCGCCGGCG TGGAATACTA TTTCGGGTAT ACGCTCCCGC AAAACGACCT CGGCGCGCAG GACTGGCGCA GCCGCGCCCA ATCCTGGAAG TGGTGCGACC TCGCGCTGCG GTTCTTCCGG GAGAACGCGA TTCCGTTTTG GAACATGCAC AACGCCGACG AGCTCGTCGG CAATCCGTCG CACGACAACT CGCGCTACTG CTTCGCGCAG CCTGGAGAAA TCTATGTCGT CTATCTGCCG AACGGCGGCA GCGCCGAGCT CGATCTCGGC CGCGGCGCGG ACGGCGCAAC GTTCCAGGTG CGCTGGTTCA ACCCGCGCGA GGGCGGCCCG CTGCAGTCCG GCAACGTGAG CGAAGTGAGA GGCTCCGGTC GCGTGTCGCT CGGCGAACCG CCGGCCGATG CCGCCGCCGA CTGGGTTGTT CTCGTGGCAC GCGCGCCCCG CCCGTGA
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Protein sequence | MRIRHSSICA LASAAIYAVF TPAAAGAAAL VAGKLEQWHK ITLSIDGPEA RETDTSPNPF LDYRMDVTFT HESGAPSYRV PGYFAVDGNA AETSAFAGRI WRAHLAPDKP GMWRYAVSFR RGPEVAVSTL EAGAPVDGCD GISGEFTVVP TDKTGRDFRA HGRLDYVGGR YLRFAGSGEY FLKVGADSPE NLLGYSDFDG TRSNKPGTPA RPDEAAPPSL LKTWQPHVRD WREGDPTWQH RKGKGLIGAL NYLASTGCNA FSFLTYNAGG DGDDVWPFVE RDDPLHFDCS KLDQWQIIFD HATALGLHLH FKLEETENDD NRPGGDGQIG DVPTALDRGK TGVERKLYLR ELIARFAHEL ALNWNLGEEN TLSTEQQQAM AAFIRDTDPY HHPIVLHTFP DWQERVYRPL LGDRSALTGV SLQTGWEQSH RRVLQWIEES AAAGKQWVVA HDEQNPHYTG VPPDTGWEGF DGTARPEKYS RPYTADDVRK HTLWGSLLAG GAGVEYYFGY TLPQNDLGAQ DWRSRAQSWK WCDLALRFFR ENAIPFWNMH NADELVGNPS HDNSRYCFAQ PGEIYVVYLP NGGSAELDLG RGADGATFQV RWFNPREGGP LQSGNVSEVR GSGRVSLGEP PADAAADWVV LVARAPRP
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