| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1829 |
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| Symbol | |
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| ID | 6206299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2277832 |
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| End bp | 2280225 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641691477 |
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| Product | permease |
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| Protein accession | YP_001818712 |
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| Protein GI | 182413646 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.752707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGATT TCCGCTTCGC CTTCCGCCAG CTCTTGAAGT CGCCGGGGTT TACCACCGTC
GCCGTGCTCA CGCTCGCGAT CGGCATCGGC TCCGCAACCG CGATGTTCAG CGCGCTCCGC
GCGCTCGTCG TCGAACCATT TTCCTATCCG AATTCCGCGC AACTCGCCCA CGTCTGGTCC
GGCGACGGCT GGCCGCTCTC CCAACCTGAC TACTTCGACC TCGCCGATCG TTCGACGTCG
TTCGCCGAAT TCGGCGTCTA CACGCCGCGA CCGGCGAATC TCGGTGGCGA CAATCCCGAG
GTCGTGACGA GCGTCTCCGC CACTCCCGGC GTGCTGCGCG CTTTCGGCAT TCCGCCGCAG
CTGGGTCGCT GGCTCGAGCC CGTTGATGAA GATTCCGGCG CGGCGCCGGT CGTGGTGATC
AGCCACCGGC TTTGGCAACG TTCCTTCGCC GGCGATCCGG CGCTCGTTGG CCGCACGATC
CGCATCAACG GCACGCTCAC CACCGTCGTC GGCATCATGC CGGCGAACTT CGAATTCGCC
GCGCCGTGGA TGCGCGGCGA CACCTGCCAC ATGTGGCTGC CGCTGAAACT CAAGCGCGGC
GAGGGTCACC GCGGCAGTCA CTGGATGTGC GGGATTGCCC GGCTCAAGCC CGGCGTGACC
GTCCCTACCG CCGACGCGGA AATCAAGAGC ATCGGCGCCC AGCTCACCCA GGAATACCCG
AACACGAACG CGCAGAAAAA ATTCCTCGTG CGCTCGCTGC ATTTCGAGAT GACGCGCTAC
ATCGGCTCGC GCGTCTGGAT GCTGTTCGGC GCCGTCTCGC TCGTGCTGCT GGTCGCCTGC
GCGAATGTCG CGAGCATGCT GCTCGCGCGC AGCGCCAAGC GGCAGGCCGA GTTCGGGGTC
CGCATCGCCC TCGGCGCCAG CCGCCGCCAG ATCATCCGGC TGGCGCTGAG CGAAAGCGTG
CTACTCTCGC TCGGCGGCGC GTTCGTCGGC CTCGTCTTCG CCTTCTACGG CGTGAAACTC
CTCGCACTCA TCGCGCCGGT CAGCGAAGCC CGCCGCGCCG CCATGGGGCT CGACCTGCGC
GTGCTCGCCT TCGCCGTCGG GGTCACCGGG CTCACCGCGC TGATCGCCGG CGTGCCGCCT
GCGCTCGCCG CACTGCGCAT TTCCGTCGCC GACCTGCTGC GCACGGACAG CCGCGGCGCC
GCCGGTTCGC GCACGCGTCA CAATCTGCTG CGCGGATTGA TCATCGGTCA GGTCACGATC
GCGTTCGTGC TCGCCAACGG CGCCGCGTTG TTCTCCGCGA GTTACGTGAA ACTGTTCTCG
GCCAACCGCG CGCTTTCCAC CGACCGCGTG TTGACGGCAC AACTGCATCT TCGGAGTGAA
CGCTATTCCA AACGAGAGGC CCGCACGCAG TTTTGGGAGC AGCTGAGCGA GCGGCTCACG
GCGCTGCCCG GCGTCACCGC CGCCGGCCTG GTCACTCAGC TGCCGCTGCA GGGTGGCAGC
AACATGAACA TTCTGGTCAA CGACGAGGTC TTCGATCCGC TCGCACAACG CGCGCTCGCC
GAGATCCGCG CGGTCACGCC GGGCTATTTC GCCGCGATCG GCGTGCCGCT CCTGCACGGC
CGGACGCTGC AGCCCGGCGA CGCCGGCAAG GATGAGATCG GCGTGGTCGT GAACCGCGCA
CTCGCCGACA AGTCCTGGCC CGGCAAGGAC CCGATTGGTC AACTCATCCG GCCCTCCAAC
GAAAAGCCGG ATTATCAGGC GCGGGTCGTC GGTGTCGTTG ACAACCTCCG GCAGTGGGGA
CCCGAGACCG ATCCGCGCCC CGAGATCTCG TGGACGCCGG ATCGCGCGTG GGGCAACAGT
GTCTTTCTTG TCGTGCGCTC GCCGCAACCC GCCAGCCAGC TGACTGCCGC CGTGCGCGAT
GCGGTGCAGG CGCTCGATCC CGACCTGCCG CTGGCGCAGA TTCGCACGAT GGAGGGCGTT
GTCGACGAAT CGTTGGCCGG CCAGCGCGCC GTCGTGCAGC TGGTGGATTT CTTCATGGCC
GTCACGCTCG GGCTGCTCGC CGTCGGTCTC TACGGCACGC TGTCGTATCA CGTGCTGCAA
CGCACCCGCG AGATTGGCGT GCGGATGGCG ATGGGCGCCG CGACCGGCGA CGTGGTGAAA
CTCGTGTTCC GGCAGGGCTC GGTTTGGCTG ACGATCGGCA TCGTGCTCGG CATCGGCGGC
GCGGTGGCGC TCACGTTCGC GATCCGGACG CTGGTCTATG GACTGGAGTC CGTGGATCCG
ATGGCGCTGG TGTGGGCCAC GCTCGCGGTG GCCGTCGCCG GCGCGATCGC CTGCTGGCTG
CCGGCCCGCC GCGCCGCGCG CGTTGACCCG ATCATCGCGT TGCGAACGGA CTAG
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| Protein sequence | MSDFRFAFRQ LLKSPGFTTV AVLTLAIGIG SATAMFSALR ALVVEPFSYP NSAQLAHVWS
GDGWPLSQPD YFDLADRSTS FAEFGVYTPR PANLGGDNPE VVTSVSATPG VLRAFGIPPQ
LGRWLEPVDE DSGAAPVVVI SHRLWQRSFA GDPALVGRTI RINGTLTTVV GIMPANFEFA
APWMRGDTCH MWLPLKLKRG EGHRGSHWMC GIARLKPGVT VPTADAEIKS IGAQLTQEYP
NTNAQKKFLV RSLHFEMTRY IGSRVWMLFG AVSLVLLVAC ANVASMLLAR SAKRQAEFGV
RIALGASRRQ IIRLALSESV LLSLGGAFVG LVFAFYGVKL LALIAPVSEA RRAAMGLDLR
VLAFAVGVTG LTALIAGVPP ALAALRISVA DLLRTDSRGA AGSRTRHNLL RGLIIGQVTI
AFVLANGAAL FSASYVKLFS ANRALSTDRV LTAQLHLRSE RYSKREARTQ FWEQLSERLT
ALPGVTAAGL VTQLPLQGGS NMNILVNDEV FDPLAQRALA EIRAVTPGYF AAIGVPLLHG
RTLQPGDAGK DEIGVVVNRA LADKSWPGKD PIGQLIRPSN EKPDYQARVV GVVDNLRQWG
PETDPRPEIS WTPDRAWGNS VFLVVRSPQP ASQLTAAVRD AVQALDPDLP LAQIRTMEGV
VDESLAGQRA VVQLVDFFMA VTLGLLAVGL YGTLSYHVLQ RTREIGVRMA MGAATGDVVK
LVFRQGSVWL TIGIVLGIGG AVALTFAIRT LVYGLESVDP MALVWATLAV AVAGAIACWL
PARRAARVDP IIALRTD
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