| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1828 |
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| Symbol | |
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| ID | 6207756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2275357 |
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| End bp | 2277768 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691476 |
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| Product | permease |
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| Protein accession | YP_001818711 |
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| Protein GI | 182413645 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.762234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCAG ATCTGCGCTT CGCCCTCCGC CAGCTCGCCA AGTCTCCTGC GTTCGCGGTG
ACCGCGATCC TCACGCTCGC ACTCGGCATC GGCGCCTGCA CCGCGATGTT CAGCATCCTC
AACGCGGTGC TGCTCCGGCC GCTGCCCTTC CGCGAACCGA CGCGACTCGT CTGGATCGAG
AACGTTTATG GCGGCGGCTT GTCCGGTCGC ACCACGCGCG TCGACGTCTT CAACGGCTGG
CGCGCGCAAA CCCAGACGCT CGACGCGCTG GCCGCATATT TCGCCTTCTC CGACTACGGC
CGGCACACGC TGACGGGCAG TGGCGAACCC GAGCGGCTGC GCGGCGTCGG CGTCTCCGAC
AACTTTTTCC CGACCCTCGG CATCCCGCTG CTGCACGGCC GCAACTTCAC CGCCGAGGAA
TGTCGCTGGC AGGGCCCCGG CGCGGTGATC CTCAGCCACT CCTTCTGGCA ACGCCGGTTC
GCCGGCGATC CCGCCGTCGT CGGCCGCACC GTCACGCTCA ACAACACGCC CACCACCATC
GTCGGCGTGC TCCCGCCCAC ATTCGACTTC GATGCGATCT TCACGCCGGG TAACGAGGTG
GAGGTGGTGA CCCCCTTCCC GCTGACCGAC GAAACCGCCC GCTGGGGTAA CACTGTGTTC
GGACTCGGGC GGATGAAGCC GGGCGTGACG CTCGAGCAGG TGCAGGCCGA GTTGACCGTG
ATCAGCCTGC GGCTGCGTGA GTCGATCGGC CGCGGCGACC AGTTCGGCGC GAAGGTGAGC
TCGCTCGACA CCGCGCTGCG CGGCCGGTTT CGCAGCGCGT TCCTGCTGCT CAGCGGCGCC
GTCGCGTGCG TGCTGGCCAT CGCCTGCGTC AATCTTTCCA ACCTCCTGCT CGCCCGGATC
AACGTGCGCC GGCAGGAGTT CGCTGTCCGG ATCGCCCTTG GGGCCCGACG GCGCCATCTC
ATCCAGCAGG CGCTCACCGA AAGCCTGCTG CTCGCGTTCG CTGGCGCATT GATCGGTCTG
CCCTGCGCCG TCGTCGCCAC CGCCGCGCTC GCGCGGCTGC AGACCTTCGG CGTGCCGCTC
TTGCAGGACG CGAGCGTCGA TCCCGTCGCG CTCGCCTTGA CCCTCGGCCT CACGACGCTC
GCCGGACTCG CCTGCGGGTT GCTGCCCGCG GTGCACCTCT CGGGCGCTCA GCGGACCGAG
TTGCTGCAGC ACTCGAACCA GCAGCGCAGC GCCGGGCGCA CGGCCGCTGT CGCGCGCAAC
ACCCTTGTCG TCGTCGAAGT CGCCCTCGCC TGCATGCTGC TCGTCGGGGC CGGCCTGCTC
TTCCGCAGCT TCAACGCCCT GCTCCAGGTG AACCTCGGTT TCCAGCCGCA GCAGGCGATG
GCGTGGCGCG TCGATCCACC CCGCTCCTTT GCCAACGTCC CCGAAGCCAG CGCCTACCTC
GACGGCGCCG TCCGCCGCGT CGCCGCCCTG CCTGGCGTGG AGTCGGTCGG GCTCAGCGAC
TGCCTTCCGC TCGGCCGCAA CCGCACCTGG GGTGCCGGCG CCGTCGGCAT TCAATACCCG
GAAGGCAAAT ACCCGATCGC CTATCCGCGG ATCGTCGACA GCGGCTATCT GCCCACGATG
AAGATCCCGC TCATCGCCGG CCGGCTCTTC GACGAACGTG ATCACGAAAA GGCCGAACGC
ACCATCGTCA TCAACCAGAC CCTCGCCCGG ATCGCCTTTC CCGACGGCCG CGATCCGCTT
GGTCAAAAAC TGAGGGTCGG GGGAGACGGT GGTTCGACGA TCATCGGTGT CGTTGGCGAC
GTCCGCCACA GCTCGCTCGA GCAGGGCGGC GGTCCCGAGA TGTATCTCTG CCTGCGTCAA
GGCCAGGACG TCAGCGCGGT GGAAATGGTG GTGCGCAGCA CGCGTCCCGC TGCCGCGCTG
ATCCCGGAAG TCCGCGCCGC GCTCGCCAGC TATGATCCCA CGCTGCCGAA CGGCGAATAC
TACGCGCTCG ACCGGCTCGT CGACAACGCC GTCGCCCCGC GCCGCTTAAT CACGCGGCTG
CTCGGTTTCT TCTCCTCGCT CGCGTTGGTG CTCGCTGCGC TGGGTCTCTA TGGCGTCATC
GCCTACTCCG TCGTGCAACG CACGCAGGAG ATCGGCATCC GGATGGCGAT CGGCGCGCAG
CAACGCGACG TGCTTGGACT AATCTTCCGC GGCGGACTGA AACTCGTCGC GCTCGGCCTC
GCGATCGGAC TCGTTGGCGC GTTCACGCTC ACGCGGTTGC TCAAGAGCCT GCTCTTCGGC
GTCACGGCTT ACGATCCGTT GAGCTTCGCC GGCAACGCCG CGTTGCTGCT GGCGGTCGCC
GCCGCCGCGT GCCTCATCCC GGCCCTGCGC GCCACGCGCG TCGATCCCGT GGTTGCCCTT
CGGGCCGAAT AG
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| Protein sequence | MIADLRFALR QLAKSPAFAV TAILTLALGI GACTAMFSIL NAVLLRPLPF REPTRLVWIE
NVYGGGLSGR TTRVDVFNGW RAQTQTLDAL AAYFAFSDYG RHTLTGSGEP ERLRGVGVSD
NFFPTLGIPL LHGRNFTAEE CRWQGPGAVI LSHSFWQRRF AGDPAVVGRT VTLNNTPTTI
VGVLPPTFDF DAIFTPGNEV EVVTPFPLTD ETARWGNTVF GLGRMKPGVT LEQVQAELTV
ISLRLRESIG RGDQFGAKVS SLDTALRGRF RSAFLLLSGA VACVLAIACV NLSNLLLARI
NVRRQEFAVR IALGARRRHL IQQALTESLL LAFAGALIGL PCAVVATAAL ARLQTFGVPL
LQDASVDPVA LALTLGLTTL AGLACGLLPA VHLSGAQRTE LLQHSNQQRS AGRTAAVARN
TLVVVEVALA CMLLVGAGLL FRSFNALLQV NLGFQPQQAM AWRVDPPRSF ANVPEASAYL
DGAVRRVAAL PGVESVGLSD CLPLGRNRTW GAGAVGIQYP EGKYPIAYPR IVDSGYLPTM
KIPLIAGRLF DERDHEKAER TIVINQTLAR IAFPDGRDPL GQKLRVGGDG GSTIIGVVGD
VRHSSLEQGG GPEMYLCLRQ GQDVSAVEMV VRSTRPAAAL IPEVRAALAS YDPTLPNGEY
YALDRLVDNA VAPRRLITRL LGFFSSLALV LAALGLYGVI AYSVVQRTQE IGIRMAIGAQ
QRDVLGLIFR GGLKLVALGL AIGLVGAFTL TRLLKSLLFG VTAYDPLSFA GNAALLLAVA
AAACLIPALR ATRVDPVVAL RAE
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