| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1817 |
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| Symbol | |
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| ID | 6205740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 2260833 |
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| End bp | 2262479 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641691466 |
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| Product | Alpha-N-arabinofuranosidase |
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| Protein accession | YP_001818701 |
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| Protein GI | 182413635 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.68893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCA CGAGTCGCAG GCAGTTTGTG AAGCAATTGG TCACGTCGGG CGCCGTGCTG
ACGGCGGCGC CGTGGCTGCG AAGCATCGGT TATGCGCAGA ATTCTCGGGC GCGCGTCGCG
CGCACGCTGA TCGATCAGGC GAACATCCGC TCGCAGCTCG ACCGGCGGTT GCTCGGCGCG
TTTCTCGAGC ATCTTGGCCG CGCGGTCTAT ACCGGCGTCT ACGAACCGGG CTCGCCGCTG
GCGGACGAAA GCGGATTTCG GCGGGACGTG ATTGCCGAGG TGAAGGGACT CGGCGTGCCG
AACATGCGGT ATCCGGGAGG AAACTTCGTC TCGGGTTATC ACTGGCAGGA CGGCGTCGGG
CCGAAGAACC AGCGGCCCAC GGTGCTGGAG CGTGCCTGGA ATTCGCTCGA GACGAATCAA
TTTGGCACGA ACGAGTTCAT GGAATGGTGC AAGCTGGTCG GCACCGAGCC GCTGCTCGGC
TTCAATCTCG GCACGGGCTC GGCCGAGGAA GCGGTGGCGT ATGTCGAATA CTGCAACGTC
GCGCGCGGCA CCAAGTGGAG CGACCTGCGG CGGCAGCACG GTTACGAACA GCCGCACAAC
GTTAAGTATT GGTGCCTCGG CAACGAGATG GACGGCCCCT GGCAGATGGG CCGGCTCACG
GCTCCGGAAT ACGGCCGGAA GGCTCGCGAC GCCGCGCGCC AAATCCGTGT GATTTCGCCC
AACGCGCAGC TCATCGCGTG CGGTTCAAGC AACACGATCT TGCCGACCTA CCTCGAGTGG
GATCGGCAGG TGCTCGAGGA GTGCTATGAC CAGGTCGATG GCATTTCGCT GCACAACTAC
TATGGCAACA CCGCGGCGCT GACCGGCGGC AGCAGCGCGC GGTATCTCGC CATGAACCTC
GACATGGAGC GGCAGATTCA CGAGATCGCC GCGGTCTGCG ACTACGTGCA GGGGCTGCAG
CGTTCGCCGA AGCGGCTGTG GCTGTCGTTC GACGAATGGA ACGTCTGGTA CCGCGCCCGC
GGCGGTGCTT TCGCGAACGG CCAGGGCAAG TTCGCGCCGC GATTGCTCGA GGAAGTCTAC
AATCTCGAGG ACGCACTGCT CGTCGGCGGT TTCGTGAACA CGTTGCTGCG CCAGTCGGCC
CGCGTGCGCG TCGGCTGCCT GGCGCAGATC GTCAACGTGA TCGCCCCGCT GGTGACCAAC
GAGACGTCGG TGCTGCGGCA GAGTATCTAC TATCCGTATG CGTGGGCACT GCAGTTTGCG
CACGGACGTG TGCTGGACCT GGAGGTGGAA GCAGAGACCT ACCCGATTCA CGCGGAAGGG
TTGCGGGCGG ATTTTGCGCG GGAGGATCAG GTGCCGTTCG TCGACGTGGT GGCGACCTGC
GACGCGGCGC GTCAGCGTGC GAGCGTGTTC CTGCTTAATC GCGATCTCGA AAACGAGCGC
GAGTTTGTCG TCGACTGGCG GAATCCAACT CCGGCCCGCG TGCTGACGGC GCTCACGCTC
ACTGGAGGCG ACCTCAAAGC GGCCAACACC TTCGACCGAC CGACGCTCGT CGCTCCGCAA
CCGCTGGAGC TGCCCGCGGT CGGAGCGAAA ATGACGTTCA AACTGCCAGC GCGCTCCTAC
AGCGTGGTGC AGTTTGCGAC GGCCTGA
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| Protein sequence | MKITSRRQFV KQLVTSGAVL TAAPWLRSIG YAQNSRARVA RTLIDQANIR SQLDRRLLGA
FLEHLGRAVY TGVYEPGSPL ADESGFRRDV IAEVKGLGVP NMRYPGGNFV SGYHWQDGVG
PKNQRPTVLE RAWNSLETNQ FGTNEFMEWC KLVGTEPLLG FNLGTGSAEE AVAYVEYCNV
ARGTKWSDLR RQHGYEQPHN VKYWCLGNEM DGPWQMGRLT APEYGRKARD AARQIRVISP
NAQLIACGSS NTILPTYLEW DRQVLEECYD QVDGISLHNY YGNTAALTGG SSARYLAMNL
DMERQIHEIA AVCDYVQGLQ RSPKRLWLSF DEWNVWYRAR GGAFANGQGK FAPRLLEEVY
NLEDALLVGG FVNTLLRQSA RVRVGCLAQI VNVIAPLVTN ETSVLRQSIY YPYAWALQFA
HGRVLDLEVE AETYPIHAEG LRADFAREDQ VPFVDVVATC DAARQRASVF LLNRDLENER
EFVVDWRNPT PARVLTALTL TGGDLKAANT FDRPTLVAPQ PLELPAVGAK MTFKLPARSY
SVVQFATA
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