| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1814 |
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| Symbol | |
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| ID | 6205969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2255444 |
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| End bp | 2257873 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691463 |
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| Product | permease |
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| Protein accession | YP_001818698 |
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| Protein GI | 182413632 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.736977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT TCCGTCACGC GCTGCGCCAG CTCGCCAAAG CCCCTGGCTT CACTGCCATC
ACCCTCCTGA CGCTCGCGCT CTGCATCGGG GCCAACAGCG CGATCTTCTC CGTCGTCCAC
GCGGTGCTGC TGAAGCCCTA TCCGTGGCGC GATTCCGACC GGCTCGTCTA CGTCTACAAT
ACCTACCCGC TGATGGGGCT GCCGGACGCG GGCGTTTCGA TCCCGGACTA CCTCGACCGG
CACGAAGCCG TGCGCGGCTT CGCCGACAGC GCGATTTACC ACTACGCGAG CTTCAATCTG
GCGGATTCCG GCACAGCCGA GCGGGTGTCG GCCGTGCGCG CGAGTCCGTC GCTGTTCTCC
ACGTTGCAGA GCGGCGCCGC CTTGGGCCGT GTGTTCACGG ATGAGGAAGC GCAACCGGGG
CGCGACCGGG TCGTCGTGCT CAGCCACGCG TGCTGGCAAA CGCGGTTTGC CGGCGACCCC
GGCATCGTCG GGCACACCCT GCGGTTGAAC GGCGAACCTT ACACCGTCGT GGGCGTGATG
CCGCGCGACT TTTACTTTCC GGCGCCGCGG ATCCAGCTCT GGGTGCCGTT CGCGTTCACC
CCGGAACAGC GCTCGGATCA GGAGCGCGGT CACGAGTTCT CGACGATGAT TGCGCGACTT
CGGCCGGACA CGGACCTCGC CGCCATTCAG CGCGAGCTCG ATGCCCTCCA GCGGCGCAAC
GCGGAGCGGC TGCCGGACTC CCGGCAGTTC TGGGAAACCA GTGGATTCGG CGGCCGCGTG
ACCGGCTTTC TCGCGCGCAA TGTGCGGGAC GTTCGCAGCA TGTTGTGGCT GGTACAGGCC
GGGGTCGCCG CCGCGCTGCT GATCGGCTGC GCGAACGTCG CGAGCCTGCT GCTCGCGCGT
GCACTGGCGA GGGAACGGGA GCTCGCGATC CGGGCCGCGC TCGGCGCCGC CCGCAGCCGG
CTGGTGCGGC TATTGTTGTC CGAAAGCCTC GTGCTTTTCC TTGTCGGCGG TGCCCTGGGA
TTGCTCGTGG CGCTGGGCGG CATCCGCGGG CTCAGCGCAT TTGGGCTGAC GCTCCTGCCG
CGCGCTTACG GCGTGCAACT CGACCTCACG ATCTTCGGGT TCACCCTGGC GTGCGCGCTG
GCCACTGGGC TGGCGTTTGG CGCGATGCCG GCGTGGTCCG CCTCACGCGG TGAAGCCGCC
GGCGCCTTGA AGGAAAGCGG CGAGCGCGCG AGTGGCGGCC GTCGCACGCA GCGACTTCGC
GCCACCCTCG TCGTGGGCGA AATCGCCCTC GCCGTCATGC TGCTCGCCAC CGCCAGCCTG
CTGATCAAGA GCGTGCAGCG GCTCGAAGCG CAGAATCCCG GGTTCGTCGC GGAAAACGTG
CTCAGCGCGA AGCTCACTCT CGCCGGCCCC GCTTACGAGG ATCCCTCGCA CCGCACCGCT
GCTTGCGAGC GGCTGCTGGA GCAGGTGCGC CCGCTGCCCG GGGTGACGCG CGCCGCGATC
ACCAGCAGCC TGCCGTTCGG CGGCAGTTTT TCGCAGAGCT CCTACGACAT CGACGGCTAC
ACGCCGCCCG CCGGCCAGCC GAAGCCGCAC GGATTCCGGA TCAGCGTGAC GCCCGACTAC
TTCGCCGCGC TGCAAATCCC GCTGCTCCGC GGGCGAACGT TCACGGCGCA GGATGACGCG
CGAGCGAATC CGGTCGTCAT CGTCGATCGC GTCATGGCCG ACCGCTACTG GCCGGGCGAG
GATCCGATCG ATCGCGTGAT CATTCGCGGC GGCGGGCCGG AACCCGTGCG TTGCACGGTG
ATTGGCGTCG TCGCGGCGGC GAAAAACCAG TCGCTGGAAA ATCCCGTCTC GAAGGAAACG
CTCTATTATC CGTTCGCCCA GCTGCCCGAC GAATATGCGA CGGTCGTCGT GAAAACCACG
GTGGCGGCCG AGTCGCTGGT CGCACCGATC CGCGCCGCAA TGGCGACCGT GGACCCGGCC
CAGCCGCTCT ATGACGTGAA GACACTCACC TCGCGGGTGG ACGAGGCACT GCTGGCGAGG
CGCGCACCGA TGGCACTGCT GTCACTGTTC AGCGGGGTGG CCCTCCTGCT TGCTGCGCTC
GGCGTTTATG GCGTGCTGGC CTTCGCCGTG GTGCAGCGCA CCACGGAGTT TGGCATTCGG
CTCGCCCTCG GCGCCACGCC GCGCGGCATC GCGTGGCTCG TGCTGCGGCA GGGCACGGTA
CTGGTGGCAG TTGGGGTGGC CGCCGGCCTT GCTGGCTATC TCGCGCTCAG CCGCGTGGTC
GGACAGCTGC TATTCGGCGT CAGTCCGGCG GACCCGCTCG CACTCTCATT GGCGCCGCTC
GTGCTCGCAG CCATCGCGCT TCTCGCCTGC GTGCTGCCGG CCCGGCGCGC GACGAAAGTC
GACCCGATGG TGGCGCTCCG CGCGCAGTAA
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| Protein sequence | MNDFRHALRQ LAKAPGFTAI TLLTLALCIG ANSAIFSVVH AVLLKPYPWR DSDRLVYVYN
TYPLMGLPDA GVSIPDYLDR HEAVRGFADS AIYHYASFNL ADSGTAERVS AVRASPSLFS
TLQSGAALGR VFTDEEAQPG RDRVVVLSHA CWQTRFAGDP GIVGHTLRLN GEPYTVVGVM
PRDFYFPAPR IQLWVPFAFT PEQRSDQERG HEFSTMIARL RPDTDLAAIQ RELDALQRRN
AERLPDSRQF WETSGFGGRV TGFLARNVRD VRSMLWLVQA GVAAALLIGC ANVASLLLAR
ALARERELAI RAALGAARSR LVRLLLSESL VLFLVGGALG LLVALGGIRG LSAFGLTLLP
RAYGVQLDLT IFGFTLACAL ATGLAFGAMP AWSASRGEAA GALKESGERA SGGRRTQRLR
ATLVVGEIAL AVMLLATASL LIKSVQRLEA QNPGFVAENV LSAKLTLAGP AYEDPSHRTA
ACERLLEQVR PLPGVTRAAI TSSLPFGGSF SQSSYDIDGY TPPAGQPKPH GFRISVTPDY
FAALQIPLLR GRTFTAQDDA RANPVVIVDR VMADRYWPGE DPIDRVIIRG GGPEPVRCTV
IGVVAAAKNQ SLENPVSKET LYYPFAQLPD EYATVVVKTT VAAESLVAPI RAAMATVDPA
QPLYDVKTLT SRVDEALLAR RAPMALLSLF SGVALLLAAL GVYGVLAFAV VQRTTEFGIR
LALGATPRGI AWLVLRQGTV LVAVGVAAGL AGYLALSRVV GQLLFGVSPA DPLALSLAPL
VLAAIALLAC VLPARRATKV DPMVALRAQ
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