Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1786 |
Symbol | |
ID | 6207997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2208120 |
End bp | 2209529 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641691435 |
Product | hypothetical protein |
Protein accession | YP_001818670 |
Protein GI | 182413604 |
COG category | [S] Function unknown |
COG ID | [COG3876] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCGGA CCGCAAAGTG GGCGCACATG GTCGGGTTTT TTGCTCCTTT CTCCTTCCAA CGGACGCTGG CCTACGCGGC TTTGGCTCTT GGGCTTCTGG GCTGCAGTGC CAGTCAGGCG CCCACCCGCT CCGCCAACGG TGCGGCCCAA AGCGCGCCCG TCGCCCCACT CTATACCCCG CCGGCCCCCG CGCCGCGGCC CAGCACACCG CTGGTCCTGC TGGGCATTGA CGTGCTCGAG GCGCAGGGCT TCGCGCCGGT GAAGGGCAAG CGCATCGGCC TGCTGACCCA CGCCGCCGGC GTGAATCGCA ATGGCGTGAG CACCATCGAG GTGTTGCGCC GCGCTCCTGG GGTAAAGCTC GTCGCGCTCT TCGGCGTGGA GCACGGCATT TACGGACTGC TGCCGGCCGA GAAAAAATAC GAGGATCACA CCGACGCGCG CACGGGTTTG CGCGTGCTAT CGCTCTATAA CGGCCGTTCG CGCAAGCCCA CCAAGGCGCA ACTCAGCGGG CTCGATGCGG TCGTCGTCGA CCTCCAGGAC ATCGGCACCC GCAGCTACAC CTACGTGAGC GCGATGAAGT TGGTGATGGA GGCCTGTTTT GAACACGACG TGGAAGTGAT CGTCCTCGAC CGACCGAACC CGCTCGGCGG ACTGAAAGCC GACGGCCCTC CGCTCGATAC GAAATGGATG AGCTACGTCG GCGCCTTTCG CGTTCCGTAT GTTCACGGGC TCACGATCGC GGAGCTCGCC CGCATGGCCA AAGAAGCGCC CGGCGTGCTC GCGGTGTCCG ACGCCGCGCG CGCGCGCGGA CGGCTGACCG TCGTTCCGAT GCGCGGCTGG CGGCGCAGCA TGCGCTGGCC GGAGACCGGG CTCACTTGGA TTCCCACCTC GCCGATGGTG CAGGATTTTT CGGCGTGCGT GGGCTATGCG ATGGTCGGGC TCGGCACGTA TTGGGATCCG CCGCGCTTCG ACCTCGGCTT CCGGCACGGC GTCGGCGACC AATACGCGTT CCGGGGAATT TCCCACAAAT CGGTGAAGAG CGAAATCATC GAACGCGAAT TGGAACAGCT GAAGATTCCG GGGCTGTCGT TCCGCCGCGT GAGTGTGCCG AATCGCGAGG GCAAACCGAT GACCGGCGTG TTCGTCGAGG TCACCGATTG GGACGAATGG AACCCGACGC AGCTGAGTTT TTATCTGATG CAGCTCGCGT GTCGGATTGA AAAAAAGAAT CCGTTCCTGG TGCCCGACTC AGCCGCCAGC GGTTTCCTTC GTCACATGGG CAGCGAGGAA TTCTTCCGCG CGCTCCAGCG CGACGGCGCG AACACCAACA TCGCGGCATT CTTCGCGGAC TGGCAGCGAC GCGCCAAGAT CTATCAGGCG CAGAGCAAAC GCTACTGGCT TTACCAGTAG
|
Protein sequence | MPRTAKWAHM VGFFAPFSFQ RTLAYAALAL GLLGCSASQA PTRSANGAAQ SAPVAPLYTP PAPAPRPSTP LVLLGIDVLE AQGFAPVKGK RIGLLTHAAG VNRNGVSTIE VLRRAPGVKL VALFGVEHGI YGLLPAEKKY EDHTDARTGL RVLSLYNGRS RKPTKAQLSG LDAVVVDLQD IGTRSYTYVS AMKLVMEACF EHDVEVIVLD RPNPLGGLKA DGPPLDTKWM SYVGAFRVPY VHGLTIAELA RMAKEAPGVL AVSDAARARG RLTVVPMRGW RRSMRWPETG LTWIPTSPMV QDFSACVGYA MVGLGTYWDP PRFDLGFRHG VGDQYAFRGI SHKSVKSEII ERELEQLKIP GLSFRRVSVP NREGKPMTGV FVEVTDWDEW NPTQLSFYLM QLACRIEKKN PFLVPDSAAS GFLRHMGSEE FFRALQRDGA NTNIAAFFAD WQRRAKIYQA QSKRYWLYQ
|
| |