| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1729 |
|---|
| Symbol | |
|---|
| ID | 6205648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 2127580 |
|---|
| End bp | 2129556 |
|---|
| Gene Length | 1977 bp |
|---|
| Protein Length | 658 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641691377 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_001818613 |
|---|
| Protein GI | 182413547 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.263205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTGC CCGCCGCCCG CGTGTTGCTG CCGCGGTTCT GGGTCGCGCT CGCCCTGAGC
CTGCCGGTGT TGGTGCTCGC CATGGGACCG ATGATCGCGC CGGCAGCGTT TCACCGGCTC
GATCCCGAAC TCTCTGGCTG GCTGCAGGCG ATCCTCACCA CGCCGGTGTT TTTCTGGTCG
GGCAAATACT TCCTTCGGCG CTGGTGGAAG TCGATTCGCG AGCGCGATCC CAACATGTTC
ACGCTGACGG TCACCGGCAC GGGCGCCGCG TACTTCTACA GCCTGGCCGC GCTGCTCTTC
GGCGATTCGT TTCCGGCGGC GCTGCGCGAC GCGCATGGCG TGCCGCTCTA CTTCGAAGCC
ACCGCCTTCA TCACCACCGT CGTGCTACTC GGCCAGATTC TCGAACAACG CGCGCACGCT
CGCACCGACG CGGCGATTCG CGCGCTGATG AACCTCGCCC CCGCGACGGC GCATCGCGTG
GTCGACGGCC GCGAGACCGA CGTACCGCTC GACGCGGTGC AAGTGGGCGA CGTGCTCCGG
GTCCGGCCGG GCGAAAAGCT GCCGGTCGAC GGCGCCGTCA CCGAAGGTGT GAGCAACGTG
GACGAGTCGA TGCTAACCGG CGAACCGGTA CCGGTCGCGA AGCAGCCGGG TGATCCGGTG
AGCGCAGGCA CGCTCAACAC CACAGGCTCG TTCCTCTTCC GCGCCGAGCG CGTCGGACGC
GACACGCTGC TCGCGCGGAT CATCCGGCTC GTTGAGGAGG CGCAGGAGAG CGAAGCGCCG
ATCCAGCGGC TCGCCGACCG CGTATCGGCG CGCTTCGTGC CCGCCGTCGC CGCGATCGCC
ACGGCCACGT TTGCGCTCTG GTGGTGGCTC GGGCCGACGC CGGCATTCAT CCACGCGCTC
GTGAACGCCG TCGCCGTGCT GATCATCGCG TGCCCGTGCG CGCTCGGGCT CGCCACGCCG
GTCTCGCTCG TCACCGGCAT TGGCCGCGGC GCGCAGGCCG GCGTGTTGGT GAAAGACGCC
GCCGCGCTCG AGCGACTCGC CTCGGCCACC ACGCTGCTGA TCGACAAGAC CGGCACGCTC
ACCGAGGGCA AACCGCGCGT CGTCGCCGTG ACGCCCCTCG GCACGTTGTC AGCTGACGAT
GTGCTGCGGT TCGCCGCCGC CGCCGAATCC GCCAGCGAGC ATCCGCTCGC CCGCGCGATC
GTCGCCGCCG CGCATGATCG CGGGCTCGCG CTGCCTGACG CGCGCGACTT CGTGGCGGAA
CCCGGCAGCG GAGTACGCGC CAATGTCGAT TCACGATCGG TGACCGTCGG CCGCGTGACC
AACACGACTC GCGACGCGGC CGTGGCGCCT GTTCACGATG CCGCAACGAC CGTCGTTGAA
GTGGCTGTCG ATGGCCTCGT CGCCGGCTCG ATCGCGCTGG CTGATGCCGT GAAGGCAACC
ACGCCGGACG CGCTGCGCGA ACTGCACCGG CTCGGCCTGA AAATCGTCAT GGTCACCGGC
GATCGCGAGT CGACCGCGCG GACCGTGGCG GAGACACTCA AGCTCGACGG CTATCACGCC
GGCGTCACGC CCGAGCGGAA GCAACAGCTC GTTCGCGAAC ACCAGCAGGC GGGTGAGCGC
GTCGTCTTCG CCGGCGACGG GCTCAACGAT GCCCCGGCGC TCGCGGCGGC GGACGTCGCC
ATCGCGATGG GCACCGGCAC GGACGTGGCG ATGCACAGCG CCGGGCTCGT CCTCGTGAAG
GGCGATCTCG GCGCCTTGGT GAAGGCCGTG CACCTCAGCC GGGCGACGCT GCGCAACATC
AAGCAGAACC TGTTCTTCGC CTTCGTCTAC AACGGTCTCG GGCTGCCGCT CGCCGCGGGC
GCGCTGTATC CGATTTTTGG CTGGCTGCTG AATCCGATGT TCGCCGGCGT GGCGATGAGC
CTCAGCTCGA TCAGCGTCGT TTCCAACGCG CTCCGCCTCC GCCACGCGCG ATTGTAG
|
|---|
| Protein sequence | MGLPAARVLL PRFWVALALS LPVLVLAMGP MIAPAAFHRL DPELSGWLQA ILTTPVFFWS
GKYFLRRWWK SIRERDPNMF TLTVTGTGAA YFYSLAALLF GDSFPAALRD AHGVPLYFEA
TAFITTVVLL GQILEQRAHA RTDAAIRALM NLAPATAHRV VDGRETDVPL DAVQVGDVLR
VRPGEKLPVD GAVTEGVSNV DESMLTGEPV PVAKQPGDPV SAGTLNTTGS FLFRAERVGR
DTLLARIIRL VEEAQESEAP IQRLADRVSA RFVPAVAAIA TATFALWWWL GPTPAFIHAL
VNAVAVLIIA CPCALGLATP VSLVTGIGRG AQAGVLVKDA AALERLASAT TLLIDKTGTL
TEGKPRVVAV TPLGTLSADD VLRFAAAAES ASEHPLARAI VAAAHDRGLA LPDARDFVAE
PGSGVRANVD SRSVTVGRVT NTTRDAAVAP VHDAATTVVE VAVDGLVAGS IALADAVKAT
TPDALRELHR LGLKIVMVTG DRESTARTVA ETLKLDGYHA GVTPERKQQL VREHQQAGER
VVFAGDGLND APALAAADVA IAMGTGTDVA MHSAGLVLVK GDLGALVKAV HLSRATLRNI
KQNLFFAFVY NGLGLPLAAG ALYPIFGWLL NPMFAGVAMS LSSISVVSNA LRLRHARL
|
|---|
| |