Gene Oter_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1728 
Symbol 
ID6208129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2125983 
End bp2127482 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content71% 
IMG OID641691376 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001818612 
Protein GI182413546 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.158171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCAA AGCCGGCCGT TGAGGTGAAC GCGTCTGCAG CGCCGGGCGG CAGCGACCGC 
GGGGACGGCG ATGAGTCGGC GGTCGCGGGC TGGGGGCGCT TGCAGCGCTC ACTGGCCGTG
CGATTGAGCG TGTGGTTCGC CGCGCTGTTC GCGATCGGGT TCACCGCGAT TTTTGCGCTG
CTGTTCTGGA CGCTGGCGCG TCAGCTCGAG ACGCGCGAGA CGGAGGCGCT CGAAGGCCGG
CTGCAGCAGT ATGCGAGCGT TTACGCCGCG TCGGGACTAC AGGGCTTGCG GCTGCGGGTG
GCGCAGGACA GCCAGGAGCC GAACGTCCGC TCGTTGTTCG TGCGCCTCGT CGGTCGCGAG
GGCGACGCGA TTTGGGGCAA GATTCCGGCG GACTGGATCG AAGAGGAGGC GCGCGCGGTC
GCGGTGCCGG ACGGCTGGGG CGGCTGGACG CAGCGCCGGA CCTACTCCGT GCGCGTGCCG
CAGGACGCGG CGCGCGATCT GGTGCTGGCC AGCCGGGTGC TGTTTGACGG CCGGCTGCTG
CAGGTCGGGC GCACCACCGA TAGCCGCGAG GTGTTGCTCG AACCGCTGCG GCGGACGTTC
CTGTGGGTCG GCGCGGGCGT GGTCGTGGTC GGTTTTGGTG CCGGCGTATT TGCCGCGCGG
CGCGCGACCA AGCCGCTGCG CGATGTGGTG GCCACGGCGC AGCGGATCAT CCGCACCGGT
GCGCTCGACG CGCGTGTGCC GCTGCCGCAG CGCAATGACG ACGTGGCGGA GTTGGTGCGC
GCGTTCAACA CGGTGCTCGA CAAAAATGCC GCGTTGCTGC GCGCGATGCG CGAGGCGCTC
GACAACGTGG CGCACGATCT GCGCACCCCG CTCACGCGGC TGCGCGGCAC GGCCGAGCTG
GCGTTGCAGA ACGCGGAGAA CCGCGGGCCG CAAGCCGAGG CGCTGGCCGA CTGCGTCGAG
CAGGCCGACG ACGTGCTGCG GCTGTTGCGT GCGCTGATGG AAATTTCCGA GGCGGAAGCC
GGCATGCTGC GGCTCGAGAA AACGGAGACC GATCTCGCGG CGCTGGCGCG CGATGCCGTG
GAACTTTACG CGGACGTCGC CGACGCGAAG TCGGTCGCGC TGAGCGTCGA GGCGGCGGCT
GCCGTGCCGG TGCTCGCGGA TGCGACGCGG CTCCGGCAGG CCATCGCCAA CTTGATCGAC
AACGCGGTGA AATACACACC GGCTGGCGGC GGCGTCGTGG TGCGGGTGGG GCCGGAGGCC
GACGCCGCGG TGCTGAGCGT CAGCGACACG GGCCCTGGCG TGCCGGCGGC CGAGCAGGCA
CGCGTGTGGG AGCGGCTCTA TCGCGGGGAT GCGAGCCGCT CGGAGCGCGG GTTGGGTCTC
GGGCTGAGCG TCGTTCGCGC GATTGTCGAA GCGCACGGCG GACGGGTTGC GTTGCGCAAC
GCTCCCGAAG CCGGCGCAGT GTTCGAAGTG CGGCTGCCGT TGCGACCGCA ACCTTCGTGA
 
Protein sequence
MSSKPAVEVN ASAAPGGSDR GDGDESAVAG WGRLQRSLAV RLSVWFAALF AIGFTAIFAL 
LFWTLARQLE TRETEALEGR LQQYASVYAA SGLQGLRLRV AQDSQEPNVR SLFVRLVGRE
GDAIWGKIPA DWIEEEARAV AVPDGWGGWT QRRTYSVRVP QDAARDLVLA SRVLFDGRLL
QVGRTTDSRE VLLEPLRRTF LWVGAGVVVV GFGAGVFAAR RATKPLRDVV ATAQRIIRTG
ALDARVPLPQ RNDDVAELVR AFNTVLDKNA ALLRAMREAL DNVAHDLRTP LTRLRGTAEL
ALQNAENRGP QAEALADCVE QADDVLRLLR ALMEISEAEA GMLRLEKTET DLAALARDAV
ELYADVADAK SVALSVEAAA AVPVLADATR LRQAIANLID NAVKYTPAGG GVVVRVGPEA
DAAVLSVSDT GPGVPAAEQA RVWERLYRGD ASRSERGLGL GLSVVRAIVE AHGGRVALRN
APEAGAVFEV RLPLRPQPS