Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1728 |
Symbol | |
ID | 6208129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2125983 |
End bp | 2127482 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641691376 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001818612 |
Protein GI | 182413546 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.158171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCAA AGCCGGCCGT TGAGGTGAAC GCGTCTGCAG CGCCGGGCGG CAGCGACCGC GGGGACGGCG ATGAGTCGGC GGTCGCGGGC TGGGGGCGCT TGCAGCGCTC ACTGGCCGTG CGATTGAGCG TGTGGTTCGC CGCGCTGTTC GCGATCGGGT TCACCGCGAT TTTTGCGCTG CTGTTCTGGA CGCTGGCGCG TCAGCTCGAG ACGCGCGAGA CGGAGGCGCT CGAAGGCCGG CTGCAGCAGT ATGCGAGCGT TTACGCCGCG TCGGGACTAC AGGGCTTGCG GCTGCGGGTG GCGCAGGACA GCCAGGAGCC GAACGTCCGC TCGTTGTTCG TGCGCCTCGT CGGTCGCGAG GGCGACGCGA TTTGGGGCAA GATTCCGGCG GACTGGATCG AAGAGGAGGC GCGCGCGGTC GCGGTGCCGG ACGGCTGGGG CGGCTGGACG CAGCGCCGGA CCTACTCCGT GCGCGTGCCG CAGGACGCGG CGCGCGATCT GGTGCTGGCC AGCCGGGTGC TGTTTGACGG CCGGCTGCTG CAGGTCGGGC GCACCACCGA TAGCCGCGAG GTGTTGCTCG AACCGCTGCG GCGGACGTTC CTGTGGGTCG GCGCGGGCGT GGTCGTGGTC GGTTTTGGTG CCGGCGTATT TGCCGCGCGG CGCGCGACCA AGCCGCTGCG CGATGTGGTG GCCACGGCGC AGCGGATCAT CCGCACCGGT GCGCTCGACG CGCGTGTGCC GCTGCCGCAG CGCAATGACG ACGTGGCGGA GTTGGTGCGC GCGTTCAACA CGGTGCTCGA CAAAAATGCC GCGTTGCTGC GCGCGATGCG CGAGGCGCTC GACAACGTGG CGCACGATCT GCGCACCCCG CTCACGCGGC TGCGCGGCAC GGCCGAGCTG GCGTTGCAGA ACGCGGAGAA CCGCGGGCCG CAAGCCGAGG CGCTGGCCGA CTGCGTCGAG CAGGCCGACG ACGTGCTGCG GCTGTTGCGT GCGCTGATGG AAATTTCCGA GGCGGAAGCC GGCATGCTGC GGCTCGAGAA AACGGAGACC GATCTCGCGG CGCTGGCGCG CGATGCCGTG GAACTTTACG CGGACGTCGC CGACGCGAAG TCGGTCGCGC TGAGCGTCGA GGCGGCGGCT GCCGTGCCGG TGCTCGCGGA TGCGACGCGG CTCCGGCAGG CCATCGCCAA CTTGATCGAC AACGCGGTGA AATACACACC GGCTGGCGGC GGCGTCGTGG TGCGGGTGGG GCCGGAGGCC GACGCCGCGG TGCTGAGCGT CAGCGACACG GGCCCTGGCG TGCCGGCGGC CGAGCAGGCA CGCGTGTGGG AGCGGCTCTA TCGCGGGGAT GCGAGCCGCT CGGAGCGCGG GTTGGGTCTC GGGCTGAGCG TCGTTCGCGC GATTGTCGAA GCGCACGGCG GACGGGTTGC GTTGCGCAAC GCTCCCGAAG CCGGCGCAGT GTTCGAAGTG CGGCTGCCGT TGCGACCGCA ACCTTCGTGA
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Protein sequence | MSSKPAVEVN ASAAPGGSDR GDGDESAVAG WGRLQRSLAV RLSVWFAALF AIGFTAIFAL LFWTLARQLE TRETEALEGR LQQYASVYAA SGLQGLRLRV AQDSQEPNVR SLFVRLVGRE GDAIWGKIPA DWIEEEARAV AVPDGWGGWT QRRTYSVRVP QDAARDLVLA SRVLFDGRLL QVGRTTDSRE VLLEPLRRTF LWVGAGVVVV GFGAGVFAAR RATKPLRDVV ATAQRIIRTG ALDARVPLPQ RNDDVAELVR AFNTVLDKNA ALLRAMREAL DNVAHDLRTP LTRLRGTAEL ALQNAENRGP QAEALADCVE QADDVLRLLR ALMEISEAEA GMLRLEKTET DLAALARDAV ELYADVADAK SVALSVEAAA AVPVLADATR LRQAIANLID NAVKYTPAGG GVVVRVGPEA DAAVLSVSDT GPGVPAAEQA RVWERLYRGD ASRSERGLGL GLSVVRAIVE AHGGRVALRN APEAGAVFEV RLPLRPQPS
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