Gene Oter_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1726 
Symbol 
ID6204953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2123649 
End bp2125190 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content66% 
IMG OID641691374 
Productprotease Do 
Protein accessionYP_001818610 
Protein GI182413544 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.618401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTC GAATTCCCTC TTCTCGCGCG GTGCTCTTCG CGCTCGGACT GCTCGCCGCC 
GGCGGGCTCG GCTGGACCGC TTCGAATGCC GCCAATCCGT CCGTCTCCGT CAAGGTCGAC
GAACGTCCCA TCAGCGCCAG CGTCAACTCG CCGCTCGGCG CCAGTTACGC CCCGATCGTC
AAACGCGTCG CCCCCAGCGT CGTGAAAGTG CTGGTGACCG AGCGCGCCAA GGCGATCCCC
GCCCAGGAGC TGCCGCCGTT CTTCAACCAT CCCGGCTTCC GGGAATTCTT CGGTGACCAG
TTCGGTCACA ACTTTGGTGG CCGTCGCGGC ACGCTCCGCC AGCCGCCGCA GGAAGGCCTC
GGCTCGGGCG TGATCGTCAG CCCCGACGGC TACATCCTGA CCAACAGCCA CGTCGTGAAA
GGCGCCGACA CGATCAAGGT GACGTTCGGC GACGGCCGCG AGTTGACCGC GAAGGTCGTC
GGCACGGACC CGCAAACCGA CCTCGCCGTG ATCAAGGTCG AAGCAAAGGA CCTGCCGGCG
ATCACGTTTG CCGACAGCGA CAGCGTCGAG GTCGGCGACC GCGTGCTGGC GGTCGGCAAT
CCCTTTGGCA TTGGGCAGAC CGTCACCAGC GGCATGGTCA GCGGACTCGG CCGCGCGATG
TTCGGCCTCG ATTATGAAGA TTTCATCCAG ACCGATGCCG CGATCAATCC GGGCAATTCC
GGCGGCGCGC TGGTCGACGC GGAGGGCCGA CTGATCGGCG TCAACACCGC GATCCTGAGC
CGGTCCGGCG GGTTTCAGGG CATCGGCTTC GCGATCCCGT CGAATCTCGC GCGCAACGTC
ATGGAACAGC TGGCGTCGAC CGGCAAGGTC GTGCGCGGCT ATCTCGGGGT GACGATCCAG
GACATCACCG CCGAACTCGC GGAGCATTTC GACCTGCCGA ATCGCGCGGG CGCGCTCGTC
GCGGAGGTGC AGCCGGATAG TCCCGCCGCG AAGGCCGGAC TCAAGGGCGG CGACGTCGTC
ACCAAGATCG ACGGCAAGGC GATCAAGGAT GCGCGCAACC TGAAGCTGAT CGTCGGCTCG
CTAAAGCCGG GCGAAAAAGT CACGGCCGAG GTGTTGCGCG ATGGGAAGAC GCAGACGATG
GAGCTGAGCG TGACCGCGCG GCCGAACGAG CGCTCGTTGT CGCGCTCGGG TGGCGGCTCC
GGCGATGACG ATGATCTTTC CGGTTCCGCC GAGGACACCG GTACGCTGAA CGGCGTCGGC
GTGGGCGATC TCGACGCGGA TGCGCGGCGC GAGTTCGACA TCCCGGCCAA CGTGCGTGGT
GCGCTGATCA CGAGCGTCGA GCCCGATTCG GCCGCGGCCG AGGCCGGACT GCAGGCGGGC
AACGTCATTC TCGAGATCAA TCGCAAGCCG GTGAAGAACG CCGAGGACGC CGTGAAGCTG
ACGGAGAAGA CCGAGTCGAA GAAGACACTG GTGCGGCTCT GGACGCCGAA CGGCATCCGT
TACGTGGTCG TCGACGAAAC GGACGAAAAG TCCGGCTCGT AA
 
Protein sequence
MNTRIPSSRA VLFALGLLAA GGLGWTASNA ANPSVSVKVD ERPISASVNS PLGASYAPIV 
KRVAPSVVKV LVTERAKAIP AQELPPFFNH PGFREFFGDQ FGHNFGGRRG TLRQPPQEGL
GSGVIVSPDG YILTNSHVVK GADTIKVTFG DGRELTAKVV GTDPQTDLAV IKVEAKDLPA
ITFADSDSVE VGDRVLAVGN PFGIGQTVTS GMVSGLGRAM FGLDYEDFIQ TDAAINPGNS
GGALVDAEGR LIGVNTAILS RSGGFQGIGF AIPSNLARNV MEQLASTGKV VRGYLGVTIQ
DITAELAEHF DLPNRAGALV AEVQPDSPAA KAGLKGGDVV TKIDGKAIKD ARNLKLIVGS
LKPGEKVTAE VLRDGKTQTM ELSVTARPNE RSLSRSGGGS GDDDDLSGSA EDTGTLNGVG
VGDLDADARR EFDIPANVRG ALITSVEPDS AAAEAGLQAG NVILEINRKP VKNAEDAVKL
TEKTESKKTL VRLWTPNGIR YVVVDETDEK SGS