| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1726 |
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| Symbol | |
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| ID | 6204953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 2123649 |
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| End bp | 2125190 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641691374 |
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| Product | protease Do |
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| Protein accession | YP_001818610 |
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| Protein GI | 182413544 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.618401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTC GAATTCCCTC TTCTCGCGCG GTGCTCTTCG CGCTCGGACT GCTCGCCGCC
GGCGGGCTCG GCTGGACCGC TTCGAATGCC GCCAATCCGT CCGTCTCCGT CAAGGTCGAC
GAACGTCCCA TCAGCGCCAG CGTCAACTCG CCGCTCGGCG CCAGTTACGC CCCGATCGTC
AAACGCGTCG CCCCCAGCGT CGTGAAAGTG CTGGTGACCG AGCGCGCCAA GGCGATCCCC
GCCCAGGAGC TGCCGCCGTT CTTCAACCAT CCCGGCTTCC GGGAATTCTT CGGTGACCAG
TTCGGTCACA ACTTTGGTGG CCGTCGCGGC ACGCTCCGCC AGCCGCCGCA GGAAGGCCTC
GGCTCGGGCG TGATCGTCAG CCCCGACGGC TACATCCTGA CCAACAGCCA CGTCGTGAAA
GGCGCCGACA CGATCAAGGT GACGTTCGGC GACGGCCGCG AGTTGACCGC GAAGGTCGTC
GGCACGGACC CGCAAACCGA CCTCGCCGTG ATCAAGGTCG AAGCAAAGGA CCTGCCGGCG
ATCACGTTTG CCGACAGCGA CAGCGTCGAG GTCGGCGACC GCGTGCTGGC GGTCGGCAAT
CCCTTTGGCA TTGGGCAGAC CGTCACCAGC GGCATGGTCA GCGGACTCGG CCGCGCGATG
TTCGGCCTCG ATTATGAAGA TTTCATCCAG ACCGATGCCG CGATCAATCC GGGCAATTCC
GGCGGCGCGC TGGTCGACGC GGAGGGCCGA CTGATCGGCG TCAACACCGC GATCCTGAGC
CGGTCCGGCG GGTTTCAGGG CATCGGCTTC GCGATCCCGT CGAATCTCGC GCGCAACGTC
ATGGAACAGC TGGCGTCGAC CGGCAAGGTC GTGCGCGGCT ATCTCGGGGT GACGATCCAG
GACATCACCG CCGAACTCGC GGAGCATTTC GACCTGCCGA ATCGCGCGGG CGCGCTCGTC
GCGGAGGTGC AGCCGGATAG TCCCGCCGCG AAGGCCGGAC TCAAGGGCGG CGACGTCGTC
ACCAAGATCG ACGGCAAGGC GATCAAGGAT GCGCGCAACC TGAAGCTGAT CGTCGGCTCG
CTAAAGCCGG GCGAAAAAGT CACGGCCGAG GTGTTGCGCG ATGGGAAGAC GCAGACGATG
GAGCTGAGCG TGACCGCGCG GCCGAACGAG CGCTCGTTGT CGCGCTCGGG TGGCGGCTCC
GGCGATGACG ATGATCTTTC CGGTTCCGCC GAGGACACCG GTACGCTGAA CGGCGTCGGC
GTGGGCGATC TCGACGCGGA TGCGCGGCGC GAGTTCGACA TCCCGGCCAA CGTGCGTGGT
GCGCTGATCA CGAGCGTCGA GCCCGATTCG GCCGCGGCCG AGGCCGGACT GCAGGCGGGC
AACGTCATTC TCGAGATCAA TCGCAAGCCG GTGAAGAACG CCGAGGACGC CGTGAAGCTG
ACGGAGAAGA CCGAGTCGAA GAAGACACTG GTGCGGCTCT GGACGCCGAA CGGCATCCGT
TACGTGGTCG TCGACGAAAC GGACGAAAAG TCCGGCTCGT AA
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| Protein sequence | MNTRIPSSRA VLFALGLLAA GGLGWTASNA ANPSVSVKVD ERPISASVNS PLGASYAPIV
KRVAPSVVKV LVTERAKAIP AQELPPFFNH PGFREFFGDQ FGHNFGGRRG TLRQPPQEGL
GSGVIVSPDG YILTNSHVVK GADTIKVTFG DGRELTAKVV GTDPQTDLAV IKVEAKDLPA
ITFADSDSVE VGDRVLAVGN PFGIGQTVTS GMVSGLGRAM FGLDYEDFIQ TDAAINPGNS
GGALVDAEGR LIGVNTAILS RSGGFQGIGF AIPSNLARNV MEQLASTGKV VRGYLGVTIQ
DITAELAEHF DLPNRAGALV AEVQPDSPAA KAGLKGGDVV TKIDGKAIKD ARNLKLIVGS
LKPGEKVTAE VLRDGKTQTM ELSVTARPNE RSLSRSGGGS GDDDDLSGSA EDTGTLNGVG
VGDLDADARR EFDIPANVRG ALITSVEPDS AAAEAGLQAG NVILEINRKP VKNAEDAVKL
TEKTESKKTL VRLWTPNGIR YVVVDETDEK SGS
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