Gene Oter_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1707 
Symbol 
ID6207634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2097817 
End bp2098290 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content70% 
IMG OID641691355 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_001818591 
Protein GI182413525 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.123854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGG CCGCACCCAC TGACACCGCC ATTGATGGCA CGACGCTGCG CGTTGGCATC 
GTGGCCGCGC GTTTCAACGG CGACCTGGTG GACGCGTTGC TCGCGCGCGC GCAGGAGCGT
CTGGCCGCGG CCGGCGTGAA GCCGCGCCAC CTCACGCTGG TGCGCGTGCC CGGTTCGCAC
GAGGTGCCAT GGGCCGTGCA GCAACTCGCG GCCCGCGGCC GCCGCGACGT GGTGATCGCC
CTCGGCGTAC TGATCGGCGG CGAAACGTCG CATCATGAGA TGGTCGGGCA GAGTGTCTCG
TACGCGCTGC AGCAGGTGGC GCTCACGACC GGCACGCCCG TGATCAACGG CGTCATCGTG
GCGAACACGC GCGCGCAGGC CGAAGCCCGC TGCCGCGGCC GGATCAACCG CGGCGTCGAA
TTCGCCGCCG CGGCGCTCGA GATCGGCACG CTGAAAAAAG AACTTTCCCG ATGA
 
Protein sequence
MSLAAPTDTA IDGTTLRVGI VAARFNGDLV DALLARAQER LAAAGVKPRH LTLVRVPGSH 
EVPWAVQQLA ARGRRDVVIA LGVLIGGETS HHEMVGQSVS YALQQVALTT GTPVINGVIV
ANTRAQAEAR CRGRINRGVE FAAAALEIGT LKKELSR