| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1664 |
|---|
| Symbol | |
|---|
| ID | 6204756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 2035849 |
|---|
| End bp | 2036853 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641691306 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001818548 |
|---|
| Protein GI | 182413482 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4864] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.142691 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCT ACCTGATCTT CCTGATCGTC GTTGGTGTTG TCGGCCTGGT GCTCGTCGGC
CTGTTCCTGT CGTTCTTCAG CGTCTGGCTG CGGGCGCTGC TGGCGGGGGC GCCGGTGAGT
CCGTTCAACC TCGTGGCGAT GCGGCTGCGG CAGGTGCCTT ACAGCGTGAT GGTCGACGCG
CGCATTCGGG CCACGAAAGC CGGCATCAAG CTCTCCATCG ACGAAATCGA GGCGCAGTAT
CTCGCCGGCG GCAACGTGAT CGCCTGCGTA CACGCGCTCA TCGCCGCGCA GAAGGCGCGG
ATCGCGCTCG ACTGGCAGCG CGCGTGCGCG ATCGACCTCG CCACGAAGGG TTCCGGCAAA
TCCGTCGAGG AGGCGGTGCG CACTTCGGTC GACCCCAAGG TGATTGACTG TCCCAATCCG
GAGAGTGGCC GCACCACGAT CGATGGCGTG GCCAAGGACG GCATTCAGGT GAAGGTGAAG
GCACGCGTGA CGGTGCGCAC CAATCTCGAC CGGTTCGTGG GCGGCGCGAA AGAGGAGACA
ATCATCGCTC GCGTCGGCGA GGGCATTGTT TCCACCATCG GCTCGGCGGA GAGCTACAAG
GTCGTGCTGG AGAGCCCCGA CGCGATTTCG AAGACCGTGC TCCATCGCGG ACTCGATGTC
GGCTCGGCGT TCGAAATCCT CTCGATCGAC ATCGCCGACG TGGACGTCGG CGAGAACGTG
GGCGCCAAGC TGCAGGAGGC ACAGGCGCAG GCCAACAAAT CGATCGCGCA GGCGCAGGCG
GAAATTCGCC GCGCGGCGGC GGTCGCCCTC GAACAGGAAA TGGTCGCGCG CGTGCAGGAG
ATGCAGGCCA AGGTTGTCGA GGCGCAATCG CAGGTGCCGC TCGCGATGGC CGAAGCATTT
CGCTCAGGCC GACTGGGTGT AATGGACTAT TTCCGCATGG AAAACATCCA GGGAGATACC
GCGATGCGGA ACAGCCTCGC CCGGCCGGAG GACAAGAAGC AGTAG
|
|---|
| Protein sequence | MNLYLIFLIV VGVVGLVLVG LFLSFFSVWL RALLAGAPVS PFNLVAMRLR QVPYSVMVDA
RIRATKAGIK LSIDEIEAQY LAGGNVIACV HALIAAQKAR IALDWQRACA IDLATKGSGK
SVEEAVRTSV DPKVIDCPNP ESGRTTIDGV AKDGIQVKVK ARVTVRTNLD RFVGGAKEET
IIARVGEGIV STIGSAESYK VVLESPDAIS KTVLHRGLDV GSAFEILSID IADVDVGENV
GAKLQEAQAQ ANKSIAQAQA EIRRAAAVAL EQEMVARVQE MQAKVVEAQS QVPLAMAEAF
RSGRLGVMDY FRMENIQGDT AMRNSLARPE DKKQ
|
|---|
| |