Gene Oter_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1638 
Symbol 
ID6208881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2012767 
End bp2013501 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content66% 
IMG OID641691280 
ProductABC transporter related 
Protein accessionYP_001818522 
Protein GI182413456 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCTC TCCCTGCACC TGCCCTCGAA TCGCGCGTGG TCCGGCCGCC GGGCGCGGTC 
GTGATCGAGA TCGAGGGCGT CACGAAGCTT TACCGGATGG GCGCGGAGAC CATTCACGCG
CTCCGTGGCG TGCGCCTGTC GATCCGGCGC AACGAGTATC TGGCGATCAT GGGCCCGTCC
GGTTCCGGCA AGTCGACGCT GATGAACATG CTCGGCTGCC TGGATACGCC GACGGCGGGC
CGCTACGATT TCAACGGCAA GAACGTCGCG CACATGGACG ACAACGAACT GGCCGAGATC
CGCAACCGGG AGATCGGCTT CGTGTTCCAG ACGTTCAACC TGCTGCCGCG CTCGAACGCG
CTGCACAACG TCGAGCTGCC GCTGATCTAC GCGGGCGTGC CGAAGCACAC CCGCATCGAG
CGGGCGCGCG AGGCGCTTGA ACATGTTGGG CTGGGCGACC GGATCCATCA CCGGCCGAAC
GAGCTCTCCG GCGGCCAGCG GCAACGCGTG GCCATTGCCC GGGCGCTGGT CACGCGTCCG
TCGATCATCC TGGCCGACGA ACCGACCGGA AATCTGGACA GCAAGACCGG CGTGGAAATC
ATGGCGCTGT TCGAACAGCT CTATGAGCAG GGCAACACCA TCATCGTGGT CACTCACGAG
GAAGACATCG CCCGGCACGC GCGCCGGATC GTGCGGTTGC GCGACGGGCT CGTCGAGAGC
GACGCCGCCG CCTGA
 
Protein sequence
MTPLPAPALE SRVVRPPGAV VIEIEGVTKL YRMGAETIHA LRGVRLSIRR NEYLAIMGPS 
GSGKSTLMNM LGCLDTPTAG RYDFNGKNVA HMDDNELAEI RNREIGFVFQ TFNLLPRSNA
LHNVELPLIY AGVPKHTRIE RAREALEHVG LGDRIHHRPN ELSGGQRQRV AIARALVTRP
SIILADEPTG NLDSKTGVEI MALFEQLYEQ GNTIIVVTHE EDIARHARRI VRLRDGLVES
DAAA