Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1638 |
Symbol | |
ID | 6208881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2012767 |
End bp | 2013501 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641691280 |
Product | ABC transporter related |
Protein accession | YP_001818522 |
Protein GI | 182413456 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCTC TCCCTGCACC TGCCCTCGAA TCGCGCGTGG TCCGGCCGCC GGGCGCGGTC GTGATCGAGA TCGAGGGCGT CACGAAGCTT TACCGGATGG GCGCGGAGAC CATTCACGCG CTCCGTGGCG TGCGCCTGTC GATCCGGCGC AACGAGTATC TGGCGATCAT GGGCCCGTCC GGTTCCGGCA AGTCGACGCT GATGAACATG CTCGGCTGCC TGGATACGCC GACGGCGGGC CGCTACGATT TCAACGGCAA GAACGTCGCG CACATGGACG ACAACGAACT GGCCGAGATC CGCAACCGGG AGATCGGCTT CGTGTTCCAG ACGTTCAACC TGCTGCCGCG CTCGAACGCG CTGCACAACG TCGAGCTGCC GCTGATCTAC GCGGGCGTGC CGAAGCACAC CCGCATCGAG CGGGCGCGCG AGGCGCTTGA ACATGTTGGG CTGGGCGACC GGATCCATCA CCGGCCGAAC GAGCTCTCCG GCGGCCAGCG GCAACGCGTG GCCATTGCCC GGGCGCTGGT CACGCGTCCG TCGATCATCC TGGCCGACGA ACCGACCGGA AATCTGGACA GCAAGACCGG CGTGGAAATC ATGGCGCTGT TCGAACAGCT CTATGAGCAG GGCAACACCA TCATCGTGGT CACTCACGAG GAAGACATCG CCCGGCACGC GCGCCGGATC GTGCGGTTGC GCGACGGGCT CGTCGAGAGC GACGCCGCCG CCTGA
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Protein sequence | MTPLPAPALE SRVVRPPGAV VIEIEGVTKL YRMGAETIHA LRGVRLSIRR NEYLAIMGPS GSGKSTLMNM LGCLDTPTAG RYDFNGKNVA HMDDNELAEI RNREIGFVFQ TFNLLPRSNA LHNVELPLIY AGVPKHTRIE RAREALEHVG LGDRIHHRPN ELSGGQRQRV AIARALVTRP SIILADEPTG NLDSKTGVEI MALFEQLYEQ GNTIIVVTHE EDIARHARRI VRLRDGLVES DAAA
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