| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1616 |
|---|
| Symbol | |
|---|
| ID | 6206949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 1984332 |
|---|
| End bp | 1986095 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641691258 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001818500 |
|---|
| Protein GI | 182413434 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.844774 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCGA CGCGAGAGCC GCAGCCGGCC GGGGTGGCCC GCTTTCGCGC CAAGTTGTTT
GCGGCGCTGA TGGTGGTGAT CGTGACGGTG ACCGGCGTGA CGCTCTACTT CACCCAGCGC
AGCGTCGCGG GCGCGTTCGA ACTGGAGTTG CAGCGCGATT TCCAGGCGCA GCTCGCGGCG
CTGCACAACG TGCAGCAGTT GCGCGACGCC GCCCTGGCTG AGCGATGTCG ATTGCTGGTG
CGCCGGCCGC GCATCCACGC CGCGTTCGAG GACAACGCGC TGGATCTGCT CTATCCGAGC
GCCCGGGACG AACTGCGCGA CATCATGGCG AGCGCGGACG ATTCGGGCCG GTACGGGCTG
CACGCGGAGT TTTATCGGTT TCTCGACCGG CATGGCGCGC CGATTCCCCC GCCGAACGCC
CGTGACGTGG GCATGCTGAC GCCCAGGGAG GAAGCGCAAC TGTCGCTCCC CGCCGCGCCC
GAGCGGCAGC AGCTGGGCTA TTTGCTGCGG GAGACCGCCG TCGGGCATGA TGATCTCGCG
GAAGTGATCG GGCTGCCGAT CGTCTCGAAC GAAACCGGCG AGGTGCTCGC CGCGCTGGTG
CTGGGATTCA AGCGGATCGC GTTTGCTGAC GAGGCACTTG GCAGCGGCAT CAAGCGCGGG
TTGTGGCTCA ACGGTCGGCT GCACCTCGAT CGGCCGGCCG CGGCCGGACC GGCGGAACTG
GCGGCCGAGG TGGCGCGCGC CGTCGCGGCC GGCGGCCCGC CGCGCAGTCT GGCCACCGTG
ACCGCGGGCG CGCCGCATCT GCTCTTTTAC AAGCAGCTGA ATCCAGGTTC CGCTTACGCG
CCGGCCTATG AAGTCTGCGT TTATCCGCTC GAAGAACTTC AGCGGCGCCA GCGCGAATCG
CTCTGGCGAA TCGTCGCCGT GGCGGCTGCG CTGCTGCTGG CCGGTTTTGG CGCGAGTCAC
CTGCTCGCGC GCCGGTTCGC GCGGCCGGTC GAGGCGTTGG TAGTGGACTC CGCTCAAAAT
CGCGCGCAGC GGGAGAAAGC CGAGGCGGCG CTCGAGCTAA CCCACGAGGA GCTGCAGCGG
GCGGCGCGTT TCTCCGCGGA CGCATCGCAC CAGTTGAAAA CGCCCGTCAC GGTGTTGCGC
GCCGGACTCG AGGAGTTGCT GGCCCGGGAG AATCTCACGG CGGAGGAGTG CCATGAGATT
TCCACGCTGA TTCATCAAAC CTACCGGCTC TCGGGCGTGA TCGAGGACTT GCTGTTGCTT
TCGCGCATGG ACGCCGGCCG GTTGAAGATC GACTTTGGGC CGGTGAACCT GAGCCAGATG
ATCGAGGCCG CGCTCGATGA TCTTAGCGCC CAGAGCGACG ACCTCGATCT GACGGTGGAG
AGCGACTACC CGCCGGATCT CATGGTCGAG GGCGAAAAGC GCTATCTTTC ACTGATCCTT
CAGAACCTGC TCGAAAATGC GCGGAAGTAT AACGAGCCGG GCGGCCGCGT GCGCATCACC
ACCCGCGCCG AAACGGGCGC GGTCTTCCTG GTCGTGGGCA ACACCGGCAA GACGATCCTG
CCCGCCGCGC AAGAGCACAT CTTCGAACGT TTTCATCGCG GCGCAGTGGG AGAGAACGTG
CCCGGCTACG GGCTCGGATT GAACCTGGCG CGGGAACTGG CGCGGCTGCA TGGTGGCGAC
CTGCGGCTGT TGCGGTCGGA AGCGGGCTGG ACCGAGTTTC AGGTCAGCTT CCGTCTGGCT
CGACTCGAAC CGACGCGACT CTAG
|
|---|
| Protein sequence | MIATREPQPA GVARFRAKLF AALMVVIVTV TGVTLYFTQR SVAGAFELEL QRDFQAQLAA
LHNVQQLRDA ALAERCRLLV RRPRIHAAFE DNALDLLYPS ARDELRDIMA SADDSGRYGL
HAEFYRFLDR HGAPIPPPNA RDVGMLTPRE EAQLSLPAAP ERQQLGYLLR ETAVGHDDLA
EVIGLPIVSN ETGEVLAALV LGFKRIAFAD EALGSGIKRG LWLNGRLHLD RPAAAGPAEL
AAEVARAVAA GGPPRSLATV TAGAPHLLFY KQLNPGSAYA PAYEVCVYPL EELQRRQRES
LWRIVAVAAA LLLAGFGASH LLARRFARPV EALVVDSAQN RAQREKAEAA LELTHEELQR
AARFSADASH QLKTPVTVLR AGLEELLARE NLTAEECHEI STLIHQTYRL SGVIEDLLLL
SRMDAGRLKI DFGPVNLSQM IEAALDDLSA QSDDLDLTVE SDYPPDLMVE GEKRYLSLIL
QNLLENARKY NEPGGRVRIT TRAETGAVFL VVGNTGKTIL PAAQEHIFER FHRGAVGENV
PGYGLGLNLA RELARLHGGD LRLLRSEAGW TEFQVSFRLA RLEPTRL
|
|---|
| |