Gene Oter_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1612 
Symbol 
ID6207389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1982081 
End bp1982623 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content64% 
IMG OID641691254 
Productredoxin domain-containing protein 
Protein accessionYP_001818496 
Protein GI182413430 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.422443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTC CTAGCTCCAC TTTCCCGGCC GCGTTCGCGC GCGGCCTCCG CGGCGGATTC 
GTCGCACTGG TTTTTGCGCT CTTGGGCCTG CCCGGTTTGG CCCGGGCGCA GATCGCGGTG
GGCGACGCAT TTCCCAACCT CGCGACGATG GGACTCACCG AAGGCAAACT GCCGGATTCG
GCGGGTCGCG TGATGCTCGT GGATTTCTGG GCCTCGTGGT GTGCGCCGTG CAAGGCCTCG
TTCCCGGCGT TCAGCCGGCT CCACACGGCG TTTGCGGAGA AAGGATTCGT GATCGTGGCC
GTGAGCGTGG ATGAAAAACC GGCGGCCTAC GCCGCGTTCG TGAAGAAATG GCAGCCGCCG
TTCACGACCG TGCTTGATCA GGCGCAGAAC CTCGTGCGCG CAGTCAAGGT TCCGGCGATG
CCGACGTCTT ATCTGATCGG GCGCGACGGG CGCGTCCGAT CGATTCATCA AGGTTTCCAC
GGGGCCGCGA CGGAGCGGGA ATTGCAGCAG TCGATTGAAA AACTTTTGGC TGAGCAGGCC
TGA
 
Protein sequence
MSFPSSTFPA AFARGLRGGF VALVFALLGL PGLARAQIAV GDAFPNLATM GLTEGKLPDS 
AGRVMLVDFW ASWCAPCKAS FPAFSRLHTA FAEKGFVIVA VSVDEKPAAY AAFVKKWQPP
FTTVLDQAQN LVRAVKVPAM PTSYLIGRDG RVRSIHQGFH GAATERELQQ SIEKLLAEQA