| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1592 |
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| Symbol | |
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| ID | 6205146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1964630 |
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| End bp | 1965208 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641691233 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001818476 |
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| Protein GI | 182413410 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02959] RNA polymerase sigma factor, SigZ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.108097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGTGA CCGAGTTCGA TGCGGCGGTG ACGGAGTTTT CGACCAAGCT GCGGGCGTTC
GTGCGCCGGC GGGTGCGCGA CGAAGCGACC GCGGATGACC TCACGCAGGA AACGCTCCTG
AAAGTCTTCC GGTCCCGGGA AACGCTCCGC GACGGCCAGC GACTCGAGGC GTGGCTGTAT
CGGATCGCGC GCACCACCCT GGTGGATCAT TACCGCCGGC AGCGGCCTAG CGAAGAATTG
CCGGAGACGA TGGCGGCGGA ATCGGTCGAC GAGATCGAGG CGTTGCGGCA GGCGCTCGCG
CTTTCGACGC AGCGGTTTTT GGAGGAGCTG CCGGAGTGTT ATCGCGTGCC GGTGCGGCTG
GCGGAGCTGG AGGGCCTGCC GCTTGCGAAG ATCGCGCTGC GGCTCGACCT GTCGCTCACC
GCGGTGAAGT CGCGCGTGCG TCGCGGCCGG GCGATGTTGA AGACGAAGCT GCAGGAGTGC
TGCCGGCTGG AATTCGACCG GAGCGGCAAG CTCATTGGCT GCGAGCGGCG TGAGCGTTGT
GGAGAGTCGC AGAAACGAAC GGCGACGGAG CGTGCTTAA
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| Protein sequence | MSVTEFDAAV TEFSTKLRAF VRRRVRDEAT ADDLTQETLL KVFRSRETLR DGQRLEAWLY
RIARTTLVDH YRRQRPSEEL PETMAAESVD EIEALRQALA LSTQRFLEEL PECYRVPVRL
AELEGLPLAK IALRLDLSLT AVKSRVRRGR AMLKTKLQEC CRLEFDRSGK LIGCERRERC
GESQKRTATE RA
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