| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1588 |
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| Symbol | |
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| ID | 6205576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1961077 |
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| End bp | 1962288 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641691229 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001818472 |
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| Protein GI | 182413406 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0287382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACGG CGTTCAGCAA ACTCGGTTTG CAGGACGCGT TGGCGTATGC CGTGCAGAAG
ATGGACTACG TAGAGCCGAC GCCGATCCAG GCGCAGGCGA TCCCCATCGT GCTGAAGGGC
GGCGACGTCA TTGGTTCGGC CCAAACGGGC ACGGGCAAGA CCGCAGCGTT CGCGCTGCCG
ATCATCCAGC GGCTGAGCAC GCACGGGCGG CTGCGCTGCC TGATCCTCGA GCCGACGCGC
GAACTGGCGC TGCAGGTGGA GGAGGCTTTT CACAAATTTG CGAAGTTTAC CGATCTGCGC
GTGACCATCG TTTACGGCGG CGTCGGTTAC GGGAAGCAAA CCAGCGATCT GAAGCGCGGC
ATGGACATCC TCGCGGCGAC GCCAGGCCGG CTGCTGGATC ACCTGGGGCA GGGCAACTGC
TCGCTCGAGG ATGTGGAGAT TCTCGTGCTC GACGAAGTCG ACCGGATGCT CGACATGGGC
TTTCTGCCGG ACGTGCGGAA GATCGTGCAG CGCTGCCCCA AGGCGCGGCA GACGCTGTTC
TTCTCGGCCA CGCTGCCGCC GGAGCTCGAG CAACTCGCCG GCTGGGCGCT GCACAATCCC
ACCAAGGTGG AGATCGGCCG CGTGCGTTCG CCGGCGGAGA CGGTGTCGCA CGGCTTTTAT
CCCGTGGTGG CTTCGCAGAA ATTCGATCTG CTGCAGCTGC TGCTGGAGCG GACGGAGTTC
AAGAGCGTGC TGATCTTCTG TCGCACGCGG ATGGGCGCGG ACCGGATTGC GCACCGGCTG
AAGACCAAGG GGCACACGGT GGGCGTGATG CACTCGGACC GCAGCCAGCG CGAACGCATC
GAGGCGCTGG ACGGTTTCAA GAGCGGCAAG TTCGAGGTGC TCGTGGCGAC GGACATCGCC
GCGCGCGGGC TCGACATCGC GGGGGTCTCG CACGTGATCA ACTACGACGT GCCGGAGAAT
CCGGAAGACT ACGTGCATCG GATCGGCCGG ACCGGCCGCG CGCACCACAC GGGCGATGCG
TTCACGCTGG TCACGGAGGA AGACGTGCGC GACGCGCGGT CGATCGAGCG TTACATGGGC
ATGGCAGTGG AGCGCAAGAA GGTCGAAGGC TTCCCCTACA TTTACTCGGC GCTGTTTGAC
GAAAAAGCGC TGGCGGAGAT CTCGGCCGCG GCGCCGAAAC CGGCCGGCCG GCTGCATCGC
GGCATGCGCT GA
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| Protein sequence | MDTAFSKLGL QDALAYAVQK MDYVEPTPIQ AQAIPIVLKG GDVIGSAQTG TGKTAAFALP
IIQRLSTHGR LRCLILEPTR ELALQVEEAF HKFAKFTDLR VTIVYGGVGY GKQTSDLKRG
MDILAATPGR LLDHLGQGNC SLEDVEILVL DEVDRMLDMG FLPDVRKIVQ RCPKARQTLF
FSATLPPELE QLAGWALHNP TKVEIGRVRS PAETVSHGFY PVVASQKFDL LQLLLERTEF
KSVLIFCRTR MGADRIAHRL KTKGHTVGVM HSDRSQRERI EALDGFKSGK FEVLVATDIA
ARGLDIAGVS HVINYDVPEN PEDYVHRIGR TGRAHHTGDA FTLVTEEDVR DARSIERYMG
MAVERKKVEG FPYIYSALFD EKALAEISAA APKPAGRLHR GMR
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