Gene Oter_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1580 
Symbol 
ID6206944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1954777 
End bp1955475 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID641691221 
Producthypothetical protein 
Protein accessionYP_001818464 
Protein GI182413398 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0504] CTP synthase (UTP-ammonia lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.900488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0981996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAAA TCGCACTGAT CGGCGACTAT TCTCCGGAGA TCACCGCGCA TCGCGCCATC 
CCGCTGGCCC TCGAACGCGC CGCAGCCGAA CTCGGCCGAT CCGTGTCCTG GCACTGGGTG
TTGACCCGCG ACCTGCACGA TCCGCCGCGC GACCTCGCTG GTTGCGCCGG GCTCTGGGTC
ACACCAGGCA GTCCCTACGA AAACACTCCC GGCGTGCTCG CGGCGATTCG TTGGGCTCGC
GAAACGCATC GTCCGCTGCT GGGCACCTGC GGCGGCTTTC AACACGCGCT GATCGAGTTC
GCGCGCAACG TCCTCGGGCT CACCGCTGCC GATCACGCGG AGACCAATCC ACATGGCGGC
GAACTCGTCG TCACGCGACT GACCTGCTCA CTCGTCGAAC GCACGCAGCA GTTGCACTTC
CTCCCCGGCA GCCGAGTGCA GGCCGCGTAT GGCGCGGATT CAGCCGAGGA GGGCTATCGC
TGCAACTACG GCCCCGCTCC GGCATATCGC GCCGCGTTTG AGCGCGCCGG TTTGCGTTTC
ACGGCCTTCG ACGAGGACGG CGCAATCCGC GCGGCCGAGT TGCCCGCTGA CGTGCATCCG
TTCTTCGTGG GGACTCTCTT CCAGCCCGAG CGTGCCGCTC TTGCCGGCCG CACTCCGCCG
CTGGCCCGCG CGTTCGTGGC CGTCGTCGCC AAGGAGTAA
 
Protein sequence
MFQIALIGDY SPEITAHRAI PLALERAAAE LGRSVSWHWV LTRDLHDPPR DLAGCAGLWV 
TPGSPYENTP GVLAAIRWAR ETHRPLLGTC GGFQHALIEF ARNVLGLTAA DHAETNPHGG
ELVVTRLTCS LVERTQQLHF LPGSRVQAAY GADSAEEGYR CNYGPAPAYR AAFERAGLRF
TAFDEDGAIR AAELPADVHP FFVGTLFQPE RAALAGRTPP LARAFVAVVA KE